RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 UNC79Q9P2D8 2635 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 IGKV1D-42A0A075B6H8 117 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 TRBV4-1A0A0J9YWV2 114 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 A0A1W2PRQ8 180 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 A6NIZ1 184 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 DEFB108AA8MXU0 73 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 EFCAB9A8MZ26 197 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 CENPBD1B2RD01 187 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 H0YHG0 523 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 RPL36A-HNRNPH2H7BZ11 118 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 K7EQD1 137 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 M0R3G1 203 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 CCL24O00175 119 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 KPNA4O00629 521 aaPredicted RBP3.2□□□□□ -1.9
NUP88-202ENST00000570937 GYG2O15488 501 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 CLOCKO15516 846 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 RAMP1O60894 148 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 SMPD2O60906 423 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 RAD51DO75771 328 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 ATP5HO75947 161 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 FARS2O95363 451 aaKnown RBP3.2□□□□□ -1.9
NUP88-202ENST00000570937 IGHG1P01857 330 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 BGLAPP02818 100 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 FABP3P05413 133 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 ASAH2BP0C7U1 165 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 NCK1P16333 377 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 TCN1P20061 433 aaPredicted RBP3.2□□□□□ -1.9
NUP88-202ENST00000570937 IGHV1-2P23083 117 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 RRM2P31350 389 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 ARR3P36575 388 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 RPL4P36578 427 aaKnown RBP3.2□□□□□ -1.9
NUP88-202ENST00000570937 P2RY4P51582 365 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 CRYBA2P53672 197 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 RAP1BP61224 184 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 RAP1AP62834 184 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 ZP4Q12836 540 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 DGCR6Q14129 220 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 GABRA6Q16445 453 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 ACKR1Q16570 336 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 MS4A18Q3C1V0 323 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 DNAL1Q4LDG9 190 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 TSPO2Q5TGU0 170 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 AGAP6Q5VW22 663 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 KRT80Q6KB66 452 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 PAMR1Q6UXH9 720 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 ZNF730Q6ZMV8 503 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 SLC35D2Q76EJ3 337 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 TRPM8Q7Z2W7 1104 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 PIWIL3Q7Z3Z3 882 aaKnown RBP3.2□□□□□ -1.9
NUP88-202ENST00000570937 OAFQ86UD1 273 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 COMTD1Q86VU5 262 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 DHFR2Q86XF0 187 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 C20orf196Q8IYI0 205 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 DEFB107AQ8IZN7 70 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 OFCC1Q8IZS5 231 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 KDM8Q8N371 416 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 LINC00471Q8N535 108 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 RNF148Q8N7C7 305 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 OR6X1Q8NH79 312 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 MAGEE2Q8TD90 523 aaPredicted RBP3.2□□□□□ -1.9
NUP88-202ENST00000570937 LIPHQ8WWY8 451 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 ACOT11Q8WXI4 607 aaPredicted RBP3.2□□□□□ -1.9
NUP88-202ENST00000570937 SGTBQ96EQ0 304 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 PYURFQ96I23 114 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 NSMCE2Q96MF7 247 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 RBP7Q96R05 134 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 OR2M2Q96R28 347 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 CCL19Q99731 98 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 FOXC2Q99958 501 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 WFDC6Q9BQY6 131 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 ZNF426Q9BUY5 554 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 C1orf21Q9H246 121 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 PLEKHF2Q9H8W4 249 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 NMNAT1Q9HAN9 279 aaPredicted RBP3.2□□□□□ -1.9
NUP88-202ENST00000570937 CRLF2Q9HC73 371 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 INIPQ9NRY2 104 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 DCAF13Q9NV06 445 aaKnown RBP3.2□□□□□ -1.9
NUP88-202ENST00000570937 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.2□□□□□ -1.9
NUP88-202ENST00000570937 ENPP4Q9Y6X5 453 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 HCFC1P51610 2035 aa3.2□□□□□ -1.9
NUP88-202ENST00000570937 APCP25054 2843 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 ARPC4-TTLL3A0A0A6YYG9 625 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 ZNF99A8MXY4 864 aaPredicted RBP3.19□□□□□ -1.9
NUP88-202ENST00000570937 C11orf98E9PRG8 122 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 M0R1B8 84 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 PDLIM1O00151 329 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 XKRYO14609 159 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 ABCD4O14678 606 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 TRAF3IP2O43734 574 aaPredicted RBP3.19□□□□□ -1.9
NUP88-202ENST00000570937 UPK3AO75631 287 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 OR7A10O76100 309 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 UBL3O95164 117 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 GADD45GO95257 159 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 LYPD3O95274 346 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 RAB36O95755 333 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 HPRP00739 348 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 PTHP01270 115 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 ERCC1P07992 297 aaPredicted RBP3.19□□□□□ -1.9
NUP88-202ENST00000570937 OR8G3PP0DMU2 310 aa3.19□□□□□ -1.9
NUP88-202ENST00000570937 IFI30P13284 250 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms