RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 APOC1P02654 83 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 LYNP07948 512 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 CSF1P09603 554 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 GLRA1P23415 457 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 CFL1P23528 166 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 GABRA5P31644 462 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 TGFBR2P37173 567 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 MAGEA2P43356 314 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 CAPZA1P52907 286 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 BLVRAP53004 296 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 ERVFRD-1P60508 538 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 MS4A2Q01362 244 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 C2orf68Q2NKX9 166 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 ATPAF1Q5TC12 328 aaPredicted RBP7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 METAP1DQ6UB28 335 aaPredicted RBP7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 ZNF788Q6ZQV5 615 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 SHFQ7M4L6 423 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 DHFR2Q86XF0 187 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 FAM185AQ8N0U4 392 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 LYG1Q8N1E2 194 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 BATF2Q8N1L9 274 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 FTMTQ8N4E7 242 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 BBS1Q8NFJ9 593 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 OR8B12Q8NGG6 310 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 OR10Z1Q8NGY1 313 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 C8orf46Q8TAG6 207 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 FAM81AQ8TBF8 368 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 NPRL2Q8WTW4 380 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 HPSE2Q8WWQ2 592 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 C12orf43Q96C57 262 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 MED30Q96HR3 178 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 HIST1H2AAQ96QV6 131 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 FEVQ99581 238 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 SSX3Q99909 188 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 DGCR6LQ9BY27 220 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 TTTY10Q9BZA0 68 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 METTL8Q9H825 291 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 YY1AP1Q9H869 796 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 NLKQ9UBE8 527 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 MPC1Q9Y5U8 109 aa7.03□□□□□ -1.28
CTDNEP1-203ENST00000570385 IGKV1D-17A0A075B6S4 117 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 TMEM210A6NLX4 147 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 PRR23D1E9PI22 279 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 G3V4G9 280 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 GPR37O15354 613 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 SIGLEC5O15389 551 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 PLXNB1O43157 2135 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 CST4P01036 141 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 ACAA1P09110 424 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 PRR23D2P0DMB1 279 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 PSG2P11465 335 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 PAICSP22234 425 aaKnown RBP7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 COX7A1P24310 79 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 DCTDP32321 178 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 CEBPDP49716 269 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 UBE2E1P51965 193 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 RPS7P62081 194 aaKnown RBP7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 GNGT1P63211 74 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 BLMHQ13867 455 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 GINS1Q14691 196 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 FAM98BQ52LJ0 330 aaKnown RBP7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 HCP5Q6MZN7 132 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 Q6ZTK2 550 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 MOB3CQ70IA8 216 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 KRT77Q7Z794 578 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 TMEM179BQ7Z7N9 219 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 COMMD2Q86X83 199 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 CPOQ8IVL8 374 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 ZDHHC23Q8IYP9 409 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 OR4M1Q8NGD0 313 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 OR51G2Q8NGK0 314 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 OR5R1Q8NH85 324 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 OTOSQ8NHW6 89 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 GIPC3Q8TF64 312 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 PPP1R14AQ96A00 147 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 CCDC124Q96CT7 223 aaKnown RBP7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 ZNF488Q96MN9 340 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 RGCCQ9H4X1 137 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 MAGIXQ9H6Y5 334 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 C19orf12Q9NSK7 152 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 NDE1Q9NXR1 346 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 ARL2BPQ9Y2Y0 163 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 SF3B6Q9Y3B4 125 aaKnown RBP7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 MAB21L2Q9Y586 359 aa7.02□□□□□ -1.29
CTDNEP1-203ENST00000570385 MEX3AA1L020 520 aaKnown RBP7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 RFPL4AA6NLU0 287 aa7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 RFPL4AL1F8VTS6 287 aa7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 M0R1W7 72 aa7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 CST1P01037 141 aa7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 MRPL3P09001 348 aaKnown RBP7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 VSIG10L2P0DP72 767 aa7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 PRKACGP22612 351 aa7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 CAV3P56539 151 aa7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 PSMA6P60900 246 aaKnown RBP7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 TRIM25Q14258 630 aaKnown RBP7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 HERPUD1Q15011 391 aa7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 SNCBQ16143 134 aa7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 SPATS1Q496A3 300 aa7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 PLA1AQ53H76 456 aa7.01□□□□□ -1.29
CTDNEP1-203ENST00000570385 FAM76BQ5HYJ3 339 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms