RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 TMEM210A6NLX4 147 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 OR2AT4A6NND4 320 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 H0YAE9 185 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 M0R1W7 72 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 SELENOFO60613 162 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 APOC1P02654 83 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 MAGEA2P43356 314 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 EFNB2P52799 333 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 BLVRAP53004 296 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 NCR3LG1Q68D85 454 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 TIGD4Q8IY51 512 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 FAM185AQ8N0U4 392 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 LYG1Q8N1E2 194 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 FTMTQ8N4E7 242 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 KLHDC1Q8N7A1 406 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 ZNRF1Q8ND25 227 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 BEND2Q8NDZ0 799 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 OR51G2Q8NGK0 314 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 AJUBAQ96IF1 538 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 DMRTB1Q96MA1 342 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 NIPSNAP1Q9BPW8 284 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 DGCR6LQ9BY27 220 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 DNTTIP1Q9H147 329 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 OR51V1Q9H2C8 321 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 KLHDC2Q9Y2U9 406 aa12.65□□□□□ -0.38
NME3-211ENST00000568561 SAMHD1Q9Y3Z3 626 aaKnown RBP12.65□□□□□ -0.38
NME3-211ENST00000568561 TCRBV5S2A0A599 114 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 SNX3O60493 162 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 GLCEO94923 617 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 CST4P01036 141 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 ACAA1P09110 424 aaPredicted RBP12.64□□□□□ -0.39
NME3-211ENST00000568561 GLRA1P23415 457 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 DCTDP32321 178 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 GPM6AP51674 278 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 CAV3P56539 151 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 ACSM1Q08AH1 577 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 MICAQ29983 383 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 ZDHHC23Q8IYP9 409 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 OR8B12Q8NGG6 310 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 OR4C13Q8NGP0 309 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 TEX47Q8TBZ9 253 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 MED30Q96HR3 178 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 RGCCQ9H4X1 137 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 C19orf12Q9NSK7 152 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 TAGLN3Q9UI15 199 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 ZNF222Q9UK12 451 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 MAB21L2Q9Y586 359 aa12.64□□□□□ -0.39
NME3-211ENST00000568561 H3BN98 237 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 CHST1O43916 411 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 LYNP07948 512 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 PSG2P11465 335 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 CAPZA1P52907 286 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 PSMA6P60900 246 aaKnown RBP12.63□□□□□ -0.39
NME3-211ENST00000568561 GNGT1P63211 74 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 BLMHQ13867 455 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 SNCBQ16143 134 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 LRRC75BQ2VPJ9 315 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 CEP78Q5JTW2 689 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 SAMD5Q5TGI4 173 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 SHFQ7M4L6 423 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.63□□□□□ -0.39
NME3-211ENST00000568561 OR10G2Q8NGC3 310 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 THEM6Q8WUY1 208 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 YY1AP1Q9H869 796 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 REEP1Q9H902 201 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 DNAH3Q8TD57 4116 aa12.63□□□□□ -0.39
NME3-211ENST00000568561 MEGF11A6BM72 1044 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 ZNF732B4DXR9 585 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 OPN1MWP04001 364 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 OPN1MW2P0DN77 364 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 OPN1MW3P0DN78 364 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 VSIG10L2P0DP72 767 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 COX7A1P24310 79 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 ERVFRD-1P60508 538 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 FAM189A2Q15884 450 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 FAM76BQ5HYJ3 339 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 OR2T5Q6IEZ7 315 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 PLBD1Q6P4A8 553 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 C16orf89Q6UX73 402 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 Q6ZPA2 131 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 CPLX4Q7Z7G2 160 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 MKXQ8IYA7 352 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 OR2T29Q8NH02 315 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 OTOSQ8NHW6 89 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 FAM81AQ8TBF8 368 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 CLPTM1LQ96KA5 538 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 ZNF488Q96MN9 340 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 ABCB9Q9NP78 766 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 ACTR3BQ9P1U1 418 aa12.62□□□□□ -0.39
NME3-211ENST00000568561 SF3B6Q9Y3B4 125 aaKnown RBP12.62□□□□□ -0.39
NME3-211ENST00000568561 KIR2DS4P43632 304 aa12.61□□□□□ -0.39
NME3-211ENST00000568561 CEBPDP49716 269 aaPredicted RBP12.61□□□□□ -0.39
NME3-211ENST00000568561 BMXP51813 675 aa12.61□□□□□ -0.39
NME3-211ENST00000568561 HABP2Q14520 560 aaPredicted RBP12.61□□□□□ -0.39
NME3-211ENST00000568561 PLA1AQ53H76 456 aa12.61□□□□□ -0.39
NME3-211ENST00000568561 FBLN7Q53RD9 439 aa12.61□□□□□ -0.39
NME3-211ENST00000568561 KPRPQ5T749 579 aaPredicted RBP12.61□□□□□ -0.39
NME3-211ENST00000568561 CRIP3Q6Q6R5 217 aa12.61□□□□□ -0.39
NME3-211ENST00000568561 BATF2Q8N1L9 274 aa12.61□□□□□ -0.39
NME3-211ENST00000568561 BBS1Q8NFJ9 593 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms