RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 FBLIM1Q8WUP2 373 aa10.89□□□□□ -0.67
CNOT1-213ENST00000568158 LRRC29Q8WV35 223 aa10.89□□□□□ -0.67
CNOT1-213ENST00000568158 ITFG2Q969R8 447 aa10.89□□□□□ -0.67
CNOT1-213ENST00000568158 SEH1LQ96EE3 360 aa10.89□□□□□ -0.67
CNOT1-213ENST00000568158 MRPL48Q96GC5 212 aaKnown RBP10.89□□□□□ -0.67
CNOT1-213ENST00000568158 INPP5EQ9NRR6 644 aa10.89□□□□□ -0.67
CNOT1-213ENST00000568158 HIF1ANQ9NWT6 349 aa10.89□□□□□ -0.67
CNOT1-213ENST00000568158 CLEC2DQ9UHP7 191 aa10.89□□□□□ -0.67
CNOT1-213ENST00000568158 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.89□□□□□ -0.672e-9■■■■□ 19.6
CNOT1-213ENST00000568158 DOCK11Q5JSL3 2073 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 NIPBLQ6KC79 2804 aaeCLIP10.88□□□□□ -0.67
CNOT1-213ENST00000568158 IGHV3OR15-7A0A075B7D8 119 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 OR4C45A6NMZ5 311 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 F5H0A9 414 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-213ENST00000568158 H0YJX3 145 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 LGALS8O00214 317 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 TNFRSF13BO14836 293 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-213ENST00000568158 CCR9P51686 369 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 GTF2A1P52655 376 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-213ENST00000568158 GBX2P52951 348 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-213ENST00000568158 DVL1P1P54792 670 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-213ENST00000568158 GMFBP60983 142 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 LCN2P80188 198 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 RIPK1Q13546 671 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 CR1LQ2VPA4 569 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 ZNF404Q494X3 552 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 TMEM244Q5VVB8 128 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 TMEM42Q69YG0 159 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 MUC20Q8N307 709 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-213ENST00000568158 OR10AC1Q8NH08 325 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 TMEM186Q96B77 213 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 TMEM80Q96HE8 168 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 JAM3Q9BX67 310 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 OR51I2Q9H344 312 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 ABCB9Q9NP78 766 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 PLCXD1Q9NUJ7 323 aa10.88□□□□□ -0.67
CNOT1-213ENST00000568158 SETD2Q9BYW2 2564 aaPredicted RBP10.88□□□□□ -0.67
CNOT1-213ENST00000568158 SONP18583 2426 aaKnown RBP10.88□□□□□ -0.67
CNOT1-213ENST00000568158 LOC107986453A0A1B0GWG9 222 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 TMEM210A6NLX4 147 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 PHF1O43189 567 aaPredicted RBP10.87□□□□□ -0.67
CNOT1-213ENST00000568158 AKR7A2O43488 359 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 RHBDL1O75783 438 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 FSTL3O95633 263 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 GYPAP02724 150 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 GNG3P63215 75 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 ST3GAL4Q11206 333 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 UBE2V2Q15819 145 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 FAM120AOSQ5T036 256 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 XAF1Q6GPH4 301 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 GLCCI1Q86VQ1 547 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 EGFL6Q8IUX8 553 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 OR5T2Q8NGG2 359 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 OR51F2Q8NH61 342 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 GATAD2BQ8WXI9 593 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 FGGYQ96C11 551 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 MYCBPQ99417 103 aaPredicted RBP10.87□□□□□ -0.67
CNOT1-213ENST00000568158 TLNRD1Q9H1K6 362 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 RASSF4Q9H2L5 321 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 MMP26Q9NRE1 261 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 ERVK-18Q9QC07 812 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 MIOXQ9UGB7 285 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 PSORS1C1Q9UIG5 152 aa10.87□□□□□ -0.67
CNOT1-213ENST00000568158 DIMT1Q9UNQ2 313 aaKnown RBP10.87□□□□□ -0.67
CNOT1-213ENST00000568158 CAB39Q9Y376 341 aaPredicted RBP10.87□□□□□ -0.67
CNOT1-213ENST00000568158 IRGMA1A4Y4 181 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 OOEPA6NGQ2 149 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 DHRS7CA6NNS2 312 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 TRAPPC2LH3BP13 241 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 ISG15P05161 165 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 UBCP0CG48 685 aaKnown RBP10.86□□□□□ -0.67
CNOT1-213ENST00000568158 RPS2P15880 293 aaKnown RBP10.86□□□□□ -0.67
CNOT1-213ENST00000568158 CFHR2P36980 270 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 RIPPLY3P57055 190 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 C6orf141Q5SZD1 244 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 FAHD2BQ6P2I3 314 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-213ENST00000568158 DCDC5Q6ZRR9 648 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 ZNF676Q8N7Q3 588 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 CCDC54Q8NEL0 328 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 OR51A4Q8NGJ6 313 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 TRMT10AQ8TBZ6 339 aaKnown RBP10.86□□□□□ -0.67
CNOT1-213ENST00000568158 NPRL2Q8WTW4 380 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 KCTD12Q96CX2 325 aaKnown RBP10.86□□□□□ -0.67
CNOT1-213ENST00000568158 ADAT3Q96EY9 351 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-213ENST00000568158 NEIL1Q96FI4 390 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-213ENST00000568158 FAHD2AQ96GK7 314 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 POM121Q96HA1 1249 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 PDCD1LG2Q9BQ51 273 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 BEX2Q9BXY8 128 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 SHARPINQ9H0F6 387 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 WDR13Q9H1Z4 485 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 SNTG1Q9NSN8 517 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 TMEM160Q9NX00 188 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 EXOSC1Q9Y3B2 195 aaKnown RBP10.86□□□□□ -0.67
CNOT1-213ENST00000568158 SIRT4Q9Y6E7 314 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-213ENST00000568158 ZFHX3Q15911 3703 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 WNK2Q9Y3S1 2297 aa10.86□□□□□ -0.67
CNOT1-213ENST00000568158 TRAV38-1A0A0B4J264 116 aa10.85□□□□□ -0.67
CNOT1-213ENST00000568158 TRAV20A0A0B4J274 112 aa10.85□□□□□ -0.67
CNOT1-213ENST00000568158 TRBV2A0A0J9YWF9 115 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms