RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 SERPINB8P50452 374 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 NUDT2P50583 147 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 GRB2P62993 217 aaKnown RBP0.4□□□□□ -2.35
CDH1-211ENST00000567320 MAPRE2Q15555 327 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 C22orf42Q6IC83 251 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 Q6ZQT7 251 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 ZCCHC7Q8N3Z6 543 aaKnown RBP0.4□□□□□ -2.35
CDH1-211ENST00000567320 OR5AR1Q8NGP9 310 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 ZNF563Q8TA94 476 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 RPEQ96AT9 228 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 OR8B2Q96RD0 313 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 ZBTB18Q99592 522 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 ACTR3CQ9C0K3 210 aaPredicted RBP0.4□□□□□ -2.35
CDH1-211ENST00000567320 TMEM38BQ9NVV0 291 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 PTTG3PQ9NZH4 202 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 ELP1O95163 1332 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 KMT2EQ8IZD2 1858 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 ANKRD65E5RJM6 399 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 CDK1P06493 297 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 SLC2A3P11169 496 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 SLC6A1P30531 599 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 HNMTP50135 292 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 RAB10P61026 200 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 RPS15AP62244 130 aaKnown RBP0.39□□□□□ -2.35
CDH1-211ENST00000567320 DHRS2Q13268 280 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 ZMYND11Q15326 602 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 ZYG11AQ6WRX3 759 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 Q8NAQ8 132 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 BPIFB6Q8NFQ5 453 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 OR9K2Q8NGE7 335 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 OR9G4Q8NGQ1 327 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 FAM57AQ8TBR7 257 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 SFXN5Q8TD22 340 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 ACMSDQ8TDX5 336 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 LMX1AQ8TE12 382 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 RXFP2Q8WXD0 754 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 RAD51AP1Q96B01 352 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 TEAD3Q99594 435 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 API5Q9BZZ5 524 aaKnown RBP0.39□□□□□ -2.35
CDH1-211ENST00000567320 LRRC40Q9H9A6 602 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 TMEM100Q9NV29 134 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 AMMECR1Q9Y4X0 333 aaPredicted RBP0.39□□□□□ -2.35
CDH1-211ENST00000567320 ENPP4Q9Y6X5 453 aa0.39□□□□□ -2.35
CDH1-211ENST00000567320 ADGRB3O60242 1522 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 TRBV9A0A0B4J1U6 114 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 IGHV6-1A0A0B4J1U7 121 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 A0A1B0GU33 70 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 SMCO3A2RU48 225 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 NDUFAB1O14561 156 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 NDC80O14777 642 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 LSM1O15116 133 aaKnown RBP0.38□□□□□ -2.35
CDH1-211ENST00000567320 PSPHP1O15172 72 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 GZMBP10144 247 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 ZNF22P17026 224 aaPredicted RBP0.38□□□□□ -2.35
CDH1-211ENST00000567320 EIF2S2P20042 333 aaKnown RBP0.38□□□□□ -2.35
CDH1-211ENST00000567320 BCKDHBP21953 392 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 PSG4Q00888 419 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 ADIGQ0VDE8 80 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 HES1Q14469 280 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 OR1Q1Q15612 314 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 CST6Q15828 149 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 CCDC183Q5T5S1 534 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 TTC23LQ6PF05 361 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 RPRMLQ8N4K4 120 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 RNF10Q8N5U6 811 aaKnown RBP0.38□□□□□ -2.35
CDH1-211ENST00000567320 ZDHHC22Q8N966 263 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 NECAB1Q8N987 351 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 OR2M7Q8NG81 312 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 OR56B2PQ8NGI1 322 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 RAB1CQ92928 201 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 NT5C3BQ969T7 300 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 SNF8Q96H20 258 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 PPP1R36Q96LQ0 422 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 PRRC1Q96M27 445 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 TSGA13Q96PP4 275 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 SLC7A5P2Q9GIP4 190 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 PITPNC1Q9UKF7 332 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 UBN2Q6ZU65 1347 aa0.38□□□□□ -2.35
CDH1-211ENST00000567320 ERICH4A6NGS2 130 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 LEUTXA8MZ59 168 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 H7C0C1 242 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 IGKV1D-33P01593 117 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 IGKV1-33P01594 117 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 RFC3P40938 356 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 ATP5OP48047 213 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 ERFP50548 548 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 ACTR1AP61163 376 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 INCA1Q0VD86 236 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 ENDOGQ14249 297 aaKnown RBP0.37□□□□□ -2.35
CDH1-211ENST00000567320 TMEM176BQ3YBM2 270 aaPredicted RBP0.37□□□□□ -2.35
CDH1-211ENST00000567320 OR2T5Q6IEZ7 315 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 RAB43Q86YS6 212 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 C2orf73Q8N5S3 287 aaPredicted RBP0.37□□□□□ -2.35
CDH1-211ENST00000567320 OR7G2Q8NG99 324 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 OR5C1Q8NGR4 320 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 OR2T29Q8NH02 315 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 OR8S1Q8NH09 359 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 CACNG8Q8WXS5 425 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 RDH12Q96NR8 316 aa0.37□□□□□ -2.35
CDH1-211ENST00000567320 ANKRA2Q9H9E1 313 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms