RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CAV3P56539 151 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 IL5RAQ01344 420 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 DMRTC1Q5HYR2 192 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 HACD2Q6Y1H2 254 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 LHFPL4Q7Z7J7 247 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 TMEM219Q86XT9 240 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 DYNAPQ8N1N2 210 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 OR5D13Q8NGL4 314 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 OR4Q3Q8NH05 313 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 OR5P3Q8WZ94 311 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 PIGCQ92535 297 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 PGAM5Q96HS1 289 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 BTBD10Q9BSF8 475 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 NMNAT2Q9BZQ4 307 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 OR10A2Q9H208 303 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 SP140LQ9H930 580 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 MED20Q9H944 212 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 RAB18Q9NP72 206 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 ZNF222Q9UK12 451 aa12.54□□□□□ -0.4
PALB2-205ENST00000567003 A0A1W2PRX2 142 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 K7EIL1 84 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 PSG2P11465 335 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 GLRA1P23415 457 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 DCTDP32321 178 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 MSX2P35548 267 aaPredicted RBP12.53□□□□□ -0.4
PALB2-205ENST00000567003 SLC15A1P46059 708 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 CAPZA1P52907 286 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 TMEM95Q3KNT9 176 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 TEX30Q5JUR7 227 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 LINC01590Q5TEZ4 76 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 CCBE1Q6UXH8 406 aaPredicted RBP12.53□□□□□ -0.4
PALB2-205ENST00000567003 HDXQ7Z353 690 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 NDUFA11Q86Y39 141 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 ERI1Q8IV48 349 aaKnown RBP12.53□□□□□ -0.4
PALB2-205ENST00000567003 CSNK2A3Q8NEV1 391 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 OR6N2Q8NGY6 317 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 RNF170Q96K19 258 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 LYZL4Q96KX0 146 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 ABHD6Q9BV23 337 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 YY1AP1Q9H869 796 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 TBC1D23Q9NUY8 699 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 CD300AQ9UGN4 299 aa12.53□□□□□ -0.4
PALB2-205ENST00000567003 DYNC2H1Q8NCM8 4307 aaKnown RBP12.53□□□□□ -0.4
PALB2-205ENST00000567003 TMEM210A6NLX4 147 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 SASH3O75995 380 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 FABP3P05413 133 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 CCL3L1P16619 93 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 GPM6AP51674 278 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 EMX1Q04741 257 aaPredicted RBP12.52□□□□□ -0.41
PALB2-205ENST00000567003 AANATQ16613 207 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 ZNF782Q6ZMW2 699 aaPredicted RBP12.52□□□□□ -0.41
PALB2-205ENST00000567003 Q6ZS46 218 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 OR4F17Q8NGA8 305 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 WIPF2Q8TF74 440 aaPredicted RBP12.52□□□□□ -0.41
PALB2-205ENST00000567003 RNF133Q8WVZ7 376 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 KCTD12Q96CX2 325 aaKnown RBP12.52□□□□□ -0.41
PALB2-205ENST00000567003 OR4F4Q96R69 305 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 TSSK6Q9BXA6 273 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.52□□□□□ -0.41
PALB2-205ENST00000567003 ARMC1Q9NVT9 282 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 TAS2R1Q9NYW7 299 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 MPC1Q9Y5U8 109 aa12.52□□□□□ -0.41
PALB2-205ENST00000567003 TRBV23-1A0A0A0MS06 115 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 NDUFAB1O14561 156 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 GMNNO75496 209 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 SOX14O95416 240 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 CFL1P23528 166 aaKnown RBP12.51□□□□□ -0.41
PALB2-205ENST00000567003 OPRL1P41146 370 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 CEBPDP49716 269 aaPredicted RBP12.51□□□□□ -0.41
PALB2-205ENST00000567003 SLC25A1P53007 311 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 PPP1R8Q12972 351 aaKnown RBP12.51□□□□□ -0.41
PALB2-205ENST00000567003 CEP78Q5JTW2 689 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 CPLX4Q7Z7G2 160 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 TIGD4Q8IY51 512 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 ZDHHC23Q8IYP9 409 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 OR4M1Q8NGD0 313 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 OR52H1Q8NGJ2 320 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 MCUR1Q96AQ8 359 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 CDCA4Q9BXL8 241 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 GORASP2Q9H8Y8 452 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 SPAG4Q9NPE6 437 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 IL20Q9NYY1 176 aa12.51□□□□□ -0.41
PALB2-205ENST00000567003 FAM183AA6NL82 134 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 CST4P01036 141 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 GASTP01350 101 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 H2BFMP0C1H6 154 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 JUNBP17275 347 aaPredicted RBP12.5□□□□□ -0.41
PALB2-205ENST00000567003 CD33P20138 364 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 ZNF273Q14593 569 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 FAM76BQ5HYJ3 339 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 RPL13AP3Q6NVV1 102 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 LIAT1Q6ZQX7 453 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 Q8N2B8 174 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 C11orf42Q8N5U0 333 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 CD177Q8N6Q3 437 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 ZNF488Q96MN9 340 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 INTS14Q96SY0 518 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 VIPAS39Q9H9C1 493 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 TCF19Q9Y242 345 aa12.5□□□□□ -0.41
PALB2-205ENST00000567003 LYVE1Q9Y5Y7 322 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms