RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 GYPAP02724 150 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 HLA-DPB1P04440 258 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 ALDOBP05062 364 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 RBMY1DP0C7P1 496 aaKnown RBP7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 POU1F1P28069 291 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 HTR5AP47898 357 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC25A1P53007 311 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 LSM6P62312 80 aaKnown RBP7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC34A1Q06495 639 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 MAB21L1Q13394 359 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 KCNMB1Q16558 191 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 MESTQ5EB52 335 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 TCTEX1D4Q5JR98 221 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 ZFAND6Q6FIF0 208 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 FOXL2NBQ6ZUU3 175 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 CENPVQ7Z7K6 275 aaPredicted RBP7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 GLB1L2Q8IW92 636 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 PNKDQ8N490 385 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 CBR4Q8N4T8 237 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 OR8D4Q8NGM9 314 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 OR2T4Q8NH00 348 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 OR4K13Q8NH42 304 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 TFAP2CQ92754 450 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 HRASLS5Q96KN8 279 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 CDCA4Q9BXL8 241 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 GABARAPL3Q9BY60 117 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 VCX3BQ9H321 246 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 RNPEPL1Q9HAU8 725 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 PTTG3PQ9NZH4 202 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 KAAG1Q9UBP8 84 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 B9D1Q9UPM9 204 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 A0A1B0GWJ7 208 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 OR6C68A6NDL8 312 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 IQCF6A8MYZ5 107 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 PRR23D1E9PI22 279 aaPredicted RBP7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 EI24O14681 340 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 SGCEO43556 437 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 MPZL2O60487 215 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC16A7O60669 478 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 PRR23D2P0DMB1 279 aaPredicted RBP7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 MSR1P21757 451 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 CD200P41217 278 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 BMXP51813 675 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 CDC42P60953 191 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 EFNB1P98172 346 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 PRB3Q04118 309 aaPredicted RBP7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 SCRN3Q0VDG4 424 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 KLRD1Q13241 179 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 BLMHQ13867 455 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 MPPED2Q15777 294 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 SNAPC1Q16533 368 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC35D3Q5M8T2 416 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC35F1Q5T1Q4 408 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 OGFRL1Q5TC84 451 aaPredicted RBP7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 SLX4IPQ5VYV7 408 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 TTC23Q5W5X9 447 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 PTCHD4Q6ZW05 846 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 Q8N7P7 452 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 PLPP7Q8NBV4 271 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 BHLHE23Q8NDY6 225 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 OR4Q3Q8NH05 313 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 TNFRSF14Q92956 283 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 RCHY1Q96PM5 261 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 NMNAT3Q96T66 252 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 HCAR1Q9BXC0 346 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 NUAK2Q9H093 628 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 SYT4Q9H2B2 425 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 SRA1Q9HD15 236 aaKnown RBP7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 H2AFY2Q9P0M6 372 aaPredicted RBP7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 KCNG2Q9UJ96 466 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 NOP16Q9Y3C1 178 aaKnown RBP7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 HERC2O95714 4834 aa7.32□□□□□ -1.24
VPS9D1-205ENST00000565452 IGKV1D-43A0A0B4J1Z2 117 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 MEGF11A6BM72 1044 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 SNTNA6NMZ2 147 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 H3BUI4 141 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC16A6O15403 523 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 PRODHO43272 600 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 CHST1O43916 411 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 DOK2O60496 412 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 LHBP01229 141 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 CCDC159P0C7I6 412 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 CHATP28329 748 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 FMO3P31513 532 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 VDAC2P45880 294 aaPredicted RBP7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 TMED1Q13445 227 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 CNN3Q15417 329 aaKnown RBP7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC25A30Q5SVS4 291 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 C12orf73Q69YU5 71 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 KCTD18Q6PI47 426 aaPredicted RBP7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 OR6V1Q8N148 313 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 LINC00482Q8N8I6 264 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC37A3Q8NCC5 494 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 ZNF555Q8NEP9 628 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 OR8J1Q8NGP2 316 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 APOBEC3DQ96AK3 386 aaPredicted RBP7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 RBMXL1Q96E39 390 aaKnown RBP7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 SLC29A1Q99808 456 aa7.31□□□□□ -1.24
VPS9D1-205ENST00000565452 NMNAT2Q9BZQ4 307 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms