RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 ZNF98A6NK75 572 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 ZNF701M0R085 212 aaPredicted RBP2.37□□□□□ -2.03
CHD9-215ENST00000565442 CCDC22O60826 627 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 UPK1BO75841 260 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 SCO1O75880 301 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 SMC2O95347 1197 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 TTC4O95801 387 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 NTF3P20783 257 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 ELF3P78545 371 aaPredicted RBP2.37□□□□□ -2.03
CHD9-215ENST00000565442 DEGS2Q6QHC5 323 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 OR51L1Q8NGJ5 315 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 OR1S1Q8NH92 325 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 TMEM234Q8WY98 164 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 ING5Q8WYH8 240 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 DHX35Q9H5Z1 703 aaKnown RBP2.37□□□□□ -2.03
CHD9-215ENST00000565442 PLEKHF2Q9H8W4 249 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 IFNKQ9P0W0 207 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 VAX2Q9UIW0 290 aa2.37□□□□□ -2.03
CHD9-215ENST00000565442 C2orf16Q68DN1 1984 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 A0A1W2PPV4 95 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 ISPDA4D126 451 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 CENPBD1B2RD01 187 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 MYL12BO14950 172 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 LHBP01229 141 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 SLC35G6P0C7Q6 338 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 CSKP41240 450 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 GDI2P50395 445 aaKnown RBP2.36□□□□□ -2.03
CHD9-215ENST00000565442 MTPNP58546 118 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 PPP1CAP62136 330 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 MED27Q6P2C8 311 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 SLC7A5P1Q8MH63 180 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 CYB561A3Q8NBI2 242 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 APCDD1LQ8NCL9 501 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 OR6K6Q8NGW6 343 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 OR10Z1Q8NGY1 313 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 TOP1MTQ969P6 601 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 SNF8Q96H20 258 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 OR51B5Q9H339 312 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 PPIL1Q9Y3C6 166 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 KLF12Q9Y4X4 402 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 SBNO1A3KN83 1393 aa2.36□□□□□ -2.03
CHD9-215ENST00000565442 KIF27Q86VH2 1401 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 IGHV3OR16-8A0A075B7F1 116 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 LOC102724200A0A096LPH7 203 aaPredicted RBP2.35□□□□□ -2.03
CHD9-215ENST00000565442 TRAV8-6A0A0B4J262 113 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 CNMDO75829 334 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 PLEKHA8P1O95397 391 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 ETHE1O95571 254 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 IL3RAP26951 378 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 TGFBR1P36897 503 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 HCCSP53701 268 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 RBX1P62877 108 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 KPRPQ5T749 579 aaPredicted RBP2.35□□□□□ -2.03
CHD9-215ENST00000565442 CPTPQ5TA50 214 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 PRSS54Q6PEW0 395 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 ORMDL3Q8N138 153 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 ARHGAP18Q8N392 663 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 SLC25A29Q8N8R3 303 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 OR4A15Q8NGL6 344 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 SFXN5Q8TD22 340 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 CHID1Q9BWS9 393 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 CHRNA10Q9GZZ6 450 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 KIR3DX1Q9H7L2 352 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 LINC00574Q9H8X3 128 aa2.35□□□□□ -2.03
CHD9-215ENST00000565442 DHCR7Q9UBM7 475 aaKnown RBP2.35□□□□□ -2.03
CHD9-215ENST00000565442 SCN4AP35499 1836 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 IGHV6-1A0A0B4J1U7 121 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 TRAV8-4A0A0B4J246 113 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 C16orf90A8MZG2 172 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 PRAMEF26H0Y7S4 382 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 TRAPPC6AO75865 159 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 P01737 135 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 MMP7P09237 267 aaPredicted RBP2.34□□□□□ -2.03
CHD9-215ENST00000565442 NELFEP18615 380 aaKnown RBP2.34□□□□□ -2.03
CHD9-215ENST00000565442 IVDP26440 423 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 PRSS3P35030 304 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 SLC35B1P78383 322 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 C2orf54Q08AI8 447 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 ST3GAL4Q11206 333 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 THOC7Q6I9Y2 204 aaKnown RBP2.34□□□□□ -2.03
CHD9-215ENST00000565442 EPGNQ6UW88 154 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 CASP12Q6UXS9 341 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 ASCL4Q6XD76 172 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 ZCCHC24Q8N2G6 241 aaKnown RBP2.34□□□□□ -2.03
CHD9-215ENST00000565442 OR5M1Q8NGP8 315 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 KLF14Q8TD94 323 aaPredicted RBP2.34□□□□□ -2.03
CHD9-215ENST00000565442 STMN4Q9H169 189 aaPredicted RBP2.34□□□□□ -2.03
CHD9-215ENST00000565442 LZTFL1Q9NQ48 299 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 CA10Q9NS85 328 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 FLVCR2Q9UPI3 526 aa2.34□□□□□ -2.03
CHD9-215ENST00000565442 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.34□□□□□ -2.04
CHD9-215ENST00000565442 TICRRQ7Z2Z1 1910 aa2.33□□□□□ -2.04
CHD9-215ENST00000565442 BAZ2AQ9UIF9 1905 aaKnown RBP2.33□□□□□ -2.04
CHD9-215ENST00000565442 IGKV1-6A0A0C4DH72 117 aa2.33□□□□□ -2.04
CHD9-215ENST00000565442 A8MWL6 223 aa2.33□□□□□ -2.04
CHD9-215ENST00000565442 J3QT63 122 aa2.33□□□□□ -2.04
CHD9-215ENST00000565442 MFNGO00587 321 aa2.33□□□□□ -2.04
CHD9-215ENST00000565442 OR7C2O60412 319 aa2.33□□□□□ -2.04
CHD9-215ENST00000565442 MAS1P04201 325 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms