RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 MMP26Q9NRE1 261 aa11.18□□□□□ -0.62
CLK3-216ENST00000564468 KAAG1Q9UBP8 84 aa11.18□□□□□ -0.62
CLK3-216ENST00000564468 GNG8Q9UK08 70 aa11.18□□□□□ -0.62
CLK3-216ENST00000564468 EXOGQ9Y2C4 368 aaKnown RBP11.18□□□□□ -0.62
CLK3-216ENST00000564468 AUP1Q9Y679 476 aa11.18□□□□□ -0.62
CLK3-216ENST00000564468 V9GYS6 101 aa11.18□□□□□ -0.62
CLK3-216ENST00000564468 SVEP1Q4LDE5 3571 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 SRRM5B3KS81 715 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 ZNF732B4DXR9 585 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 P2RY10O00398 339 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 DLGAP1O14490 977 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 FADS2O95864 444 aaKnown RBP11.17□□□□□ -0.62
CLK3-216ENST00000564468 AVPP01185 164 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 PPIAL4GP0DN37 164 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 FAHP16930 419 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 GABRB1P18505 474 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 GPM6AP51674 278 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 ACTA2P62736 377 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 ACTG2P63267 376 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 CSNK2BP67870 215 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 ZNF85Q03923 595 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 KLHL22Q53GT1 634 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 ARMCX4Q5H9R4 360 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 CEP78Q5JTW2 689 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 TTC23Q5W5X9 447 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 PLCXD3Q63HM9 321 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 LYPD2Q6UXB3 125 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 C1orf229Q6ZS94 237 aaPredicted RBP11.17□□□□□ -0.62
CLK3-216ENST00000564468 Q6ZSR3 168 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 SLC36A1Q7Z2H8 476 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 SCCPDHQ8NBX0 429 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 OR14K1Q8NGZ2 314 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 ZNF418Q8TF45 676 aaPredicted RBP11.17□□□□□ -0.62
CLK3-216ENST00000564468 HPSE2Q8WWQ2 592 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 RORBQ92753 470 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 C10orf35Q96D05 121 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 TECTBQ96PL2 329 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 OCEL1Q9H607 264 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 PPP1R3EQ9H7J1 279 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 PLEKHA1Q9HB21 404 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 INPP5EQ9NRR6 644 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 DNAJB11Q9UBS4 358 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 SLC22A13Q9Y226 551 aa11.17□□□□□ -0.62
CLK3-216ENST00000564468 RPL36Q9Y3U8 105 aaKnown RBP11.17□□□□□ -0.62
CLK3-216ENST00000564468 IGHV2-70DA0A0C4DH43 119 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 KIR2DS1A0A191URI9 304 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 A0A1B0GTI1 187 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 J3QRE1 110 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 TNFRSF13BO14836 293 aaPredicted RBP11.16□□□□□ -0.62
CLK3-216ENST00000564468 SYT7O43581 403 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 ENSAO43768 121 aaKnown RBP11.16□□□□□ -0.62
CLK3-216ENST00000564468 ECDO95905 644 aaPredicted RBP11.16□□□□□ -0.62
CLK3-216ENST00000564468 SERPINA3P01011 423 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 GYPAP02724 150 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 LIPFP07098 398 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 RPSAP08865 295 aaKnown RBP11.16□□□□□ -0.62
CLK3-216ENST00000564468 UBCP0CG48 685 aaKnown RBP11.16□□□□□ -0.62
CLK3-216ENST00000564468 DBTP11182 482 aaKnown RBP11.16□□□□□ -0.62
CLK3-216ENST00000564468 EPHA1P21709 976 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 CCL1P22362 96 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 FPR2P25090 351 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 ISL1P61371 349 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 ZNF91Q05481 1191 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 GABPB1Q06547 395 aaPredicted RBP11.16□□□□□ -0.62
CLK3-216ENST00000564468 PAX8Q06710 450 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 RAB40BQ12829 278 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 RCN1Q15293 331 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 CDONQ4KMG0 1287 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 TP53I3Q53FA7 332 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 TMEM244Q5VVB8 128 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 LPCAT4Q643R3 524 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 ZNF841Q6ZN19 808 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 FAM90A1Q86YD7 464 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 ZNF573Q86YE8 665 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 RPL3LQ92901 407 aaKnown RBP11.16□□□□□ -0.62
CLK3-216ENST00000564468 NUDT16L1Q9BRJ7 211 aaKnown RBP11.16□□□□□ -0.62
CLK3-216ENST00000564468 DNTTIP1Q9H147 329 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 OR51I2Q9H344 312 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 OPN4Q9UHM6 478 aa11.16□□□□□ -0.62
CLK3-216ENST00000564468 GPR37O15354 613 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 TMPRSS2O15393 492 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 HTR1AP08908 422 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 EGR1P18146 543 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 PAX2Q02962 417 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 MRPL28Q13084 256 aaKnown RBP11.15□□□□□ -0.62
CLK3-216ENST00000564468 GALEQ14376 348 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 LRRC36Q1X8D7 754 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 TMEM42Q69YG0 159 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 FDX2Q6P4F2 183 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 PNLDC1Q8NA58 520 aaKnown RBP11.15□□□□□ -0.62
CLK3-216ENST00000564468 SETD9Q8NE22 299 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 HAVCR2Q8TDQ0 301 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 LGALS12Q96DT0 336 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 JMJD8Q96S16 334 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 SUCNR1Q9BXA5 334 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 VCXQ9H320 206 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 ACOXLQ9NUZ1 547 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 MRPS18AQ9NVS2 196 aaKnown RBP11.15□□□□□ -0.62
CLK3-216ENST00000564468 CTSZQ9UBR2 303 aa11.15□□□□□ -0.62
CLK3-216ENST00000564468 SLC7A11Q9UPY5 501 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms