RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 SVEP1Q4LDE5 3571 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 SRRM5B3KS81 715 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 ZNF732B4DXR9 585 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 P2RY10O00398 339 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 DLGAP1O14490 977 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 FADS2O95864 444 aaKnown RBP11.17□□□□□ -0.62
CLK3-213ENST00000563842 AVPP01185 164 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 PPIAL4GP0DN37 164 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 FAHP16930 419 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 GABRB1P18505 474 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 GPM6AP51674 278 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 ACTA2P62736 377 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 ACTG2P63267 376 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 CSNK2BP67870 215 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 ZNF85Q03923 595 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 KLHL22Q53GT1 634 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 ARMCX4Q5H9R4 360 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 CEP78Q5JTW2 689 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 TTC23Q5W5X9 447 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 PLCXD3Q63HM9 321 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 LYPD2Q6UXB3 125 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 C1orf229Q6ZS94 237 aaPredicted RBP11.17□□□□□ -0.62
CLK3-213ENST00000563842 Q6ZSR3 168 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 SLC36A1Q7Z2H8 476 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 SCCPDHQ8NBX0 429 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 OR14K1Q8NGZ2 314 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 ZNF418Q8TF45 676 aaPredicted RBP11.17□□□□□ -0.62
CLK3-213ENST00000563842 HPSE2Q8WWQ2 592 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 RORBQ92753 470 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 C10orf35Q96D05 121 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 TECTBQ96PL2 329 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 OCEL1Q9H607 264 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 PPP1R3EQ9H7J1 279 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 PLEKHA1Q9HB21 404 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 INPP5EQ9NRR6 644 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 DNAJB11Q9UBS4 358 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 SLC22A13Q9Y226 551 aa11.17□□□□□ -0.62
CLK3-213ENST00000563842 RPL36Q9Y3U8 105 aaKnown RBP11.17□□□□□ -0.62
CLK3-213ENST00000563842 IGHV2-70DA0A0C4DH43 119 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 KIR2DS1A0A191URI9 304 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 A0A1B0GTI1 187 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 RNF212BA8MTL3 300 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 J3QRE1 110 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 TNFRSF13BO14836 293 aaPredicted RBP11.16□□□□□ -0.62
CLK3-213ENST00000563842 SYT7O43581 403 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 ENSAO43768 121 aaKnown RBP11.16□□□□□ -0.62
CLK3-213ENST00000563842 ECDO95905 644 aaPredicted RBP11.16□□□□□ -0.62
CLK3-213ENST00000563842 SERPINA3P01011 423 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 GYPAP02724 150 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 LIPFP07098 398 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 RPSAP08865 295 aaKnown RBP11.16□□□□□ -0.62
CLK3-213ENST00000563842 UBCP0CG48 685 aaKnown RBP11.16□□□□□ -0.62
CLK3-213ENST00000563842 DBTP11182 482 aaKnown RBP11.16□□□□□ -0.62
CLK3-213ENST00000563842 EPHA1P21709 976 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 CCL1P22362 96 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 FPR2P25090 351 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 ISL1P61371 349 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 ZNF91Q05481 1191 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 GABPB1Q06547 395 aaPredicted RBP11.16□□□□□ -0.62
CLK3-213ENST00000563842 PAX8Q06710 450 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 RAB40BQ12829 278 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 RCN1Q15293 331 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 CDONQ4KMG0 1287 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 TP53I3Q53FA7 332 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 TMEM244Q5VVB8 128 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 LPCAT4Q643R3 524 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 ZNF841Q6ZN19 808 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 FAM90A1Q86YD7 464 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 ZNF573Q86YE8 665 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 RPL3LQ92901 407 aaKnown RBP11.16□□□□□ -0.62
CLK3-213ENST00000563842 NUDT16L1Q9BRJ7 211 aaKnown RBP11.16□□□□□ -0.62
CLK3-213ENST00000563842 DNTTIP1Q9H147 329 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 OR51I2Q9H344 312 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 OPN4Q9UHM6 478 aa11.16□□□□□ -0.62
CLK3-213ENST00000563842 GPR37O15354 613 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 TMPRSS2O15393 492 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 HTR1AP08908 422 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 EGR1P18146 543 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 PAX2Q02962 417 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 MRPL28Q13084 256 aaKnown RBP11.15□□□□□ -0.62
CLK3-213ENST00000563842 GALEQ14376 348 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 LRRC36Q1X8D7 754 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 TMEM42Q69YG0 159 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 FDX2Q6P4F2 183 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 PNLDC1Q8NA58 520 aaKnown RBP11.15□□□□□ -0.62
CLK3-213ENST00000563842 SETD9Q8NE22 299 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 HAVCR2Q8TDQ0 301 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 LGALS12Q96DT0 336 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 JMJD8Q96S16 334 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 SUCNR1Q9BXA5 334 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 VCXQ9H320 206 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 ACOXLQ9NUZ1 547 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 MRPS18AQ9NVS2 196 aaKnown RBP11.15□□□□□ -0.62
CLK3-213ENST00000563842 CTSZQ9UBR2 303 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 SLC7A11Q9UPY5 501 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 POLDIP2Q9Y2S7 368 aa11.15□□□□□ -0.62
CLK3-213ENST00000563842 IGHV3OR15-7A0A075B7D8 119 aa11.14□□□□□ -0.63
CLK3-213ENST00000563842 IRGMA1A4Y4 181 aa11.14□□□□□ -0.63
CLK3-213ENST00000563842 NKX6-3A6NJ46 265 aa11.14□□□□□ -0.63
CLK3-213ENST00000563842 AKR7A2O43488 359 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms