RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 OR5M11Q96RB7 305 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 SRA1Q9HD15 236 aaKnown RBP8.32□□□□□ -1.08
SF3B3-204ENST00000563739 HAO2Q9NYQ3 351 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 ZNF391Q9UJN7 358 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 AURKCQ9UQB9 309 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 NOP16Q9Y3C1 178 aaKnown RBP8.32□□□□□ -1.08
SF3B3-204ENST00000563739 ENPP4Q9Y6X5 453 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 TRBV4-1A0A0J9YWV2 114 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 TCRBV5S2A0A599 114 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 GGT3PA6NGU5 568 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 ODF3BA8MYP8 253 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 CIB2O75838 187 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 NOS3P29474 1203 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 CRABP1P29762 137 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 IFNA8P32881 189 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 DLX6P56179 175 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 TPTEP56180 551 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 GMFBP60983 142 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 MS4A2Q01362 244 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 KPNB1Q14974 876 aaKnown RBP8.31□□□□□ -1.08
SF3B3-204ENST00000563739 PLA1AQ53H76 456 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 DEFB121Q5J5C9 76 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 DPY19L2P2Q6ZN68 376 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 SLC16A9Q7RTY1 509 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 DPY19L4Q7Z388 723 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 CYP4Z1Q86W10 505 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 DHFR2Q86XF0 187 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 PYURFQ96I23 114 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 C7orf34Q96L11 122 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 DHRS1Q96LJ7 313 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 FNDC11Q9BVV2 318 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 DNTTIP1Q9H147 329 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 RPRD1BQ9NQG5 326 aaKnown RBP8.31□□□□□ -1.08
SF3B3-204ENST00000563739 NDUFAF4Q9P032 175 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 SLC25A10Q9UBX3 287 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-204ENST00000563739 FRAS1Q86XX4 4008 aa8.31□□□□□ -1.08
SF3B3-204ENST00000563739 TVP23AA6NH52 213 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 ARPC3O15145 178 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 AKR7A2O43488 359 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 SYNGR1O43759 233 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 ACAA1P09110 424 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-204ENST00000563739 CCL3L1P16619 93 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 ACKR3P25106 362 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 PYCR1P32322 319 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 CENPAP49450 140 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 PRKXP51817 358 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 ZNF273Q14593 569 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 CNN3Q15417 329 aaKnown RBP8.3□□□□□ -1.08
SF3B3-204ENST00000563739 LRRC10Q5BKY1 277 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 DRAM2Q6UX65 266 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 ZDHHC21Q8IVQ6 265 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 ZNRF1Q8ND25 227 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 SDR9C7Q8NEX9 313 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 OR9Q1Q8NGQ5 310 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 OR10Z1Q8NGY1 313 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 OR4K13Q8NH42 304 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 OR5K1Q8NHB7 308 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 RPL3LQ92901 407 aaKnown RBP8.3□□□□□ -1.08
SF3B3-204ENST00000563739 RCC1LQ96I51 464 aaKnown RBP8.3□□□□□ -1.08
SF3B3-204ENST00000563739 ERMAPQ96PL5 475 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-204ENST00000563739 ANKRD19PQ9H560 264 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 DCLRE1BQ9H816 532 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 RAB18Q9NP72 206 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 C14orf119Q9NWQ9 140 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 TMEM5Q9Y2B1 443 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 SF3B6Q9Y3B4 125 aaKnown RBP8.3□□□□□ -1.08
SF3B3-204ENST00000563739 RHBDD3Q9Y3P4 386 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 COMMD3-BMI1R4GMX3 469 aa8.3□□□□□ -1.08
SF3B3-204ENST00000563739 A0A1W2PRQ8 180 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 UNC119BA6NIH7 251 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 AQP12BA6NM10 295 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 RHBDL1O75783 438 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 DIRAS1O95057 198 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 FABP3P05413 133 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 PSG2P11465 335 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 RHCEP18577 417 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 COX7A1P24310 79 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 MAGEA2P43356 314 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 ACTR3P61158 418 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 SLC35A2P78381 396 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 DGCR6Q14129 220 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 FLOT2Q14254 428 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 FAM76BQ5HYJ3 339 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 CASC10Q5T4H9 136 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 DNM1P34Q6PK57 102 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 TCF23Q7RTU1 214 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 AQP12AQ8IXF9 295 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 MYDGFQ969H8 173 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 SGK3Q96BR1 496 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 LYZL4Q96KX0 146 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 LRGUKQ96M69 825 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 AMELYQ99218 206 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 FAM234AQ9H0X4 552 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 OR52D1Q9H346 318 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 MAGIXQ9H6Y5 334 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 IL1RAPQ9NPH3 570 aa8.29□□□□□ -1.08
SF3B3-204ENST00000563739 NKX1-2Q9UD57 310 aaPredicted RBP8.29□□□□□ -1.08
SF3B3-204ENST00000563739 FAM32AQ9Y421 112 aaKnown RBP8.29□□□□□ -1.08
SF3B3-204ENST00000563739 LSM4Q9Y4Z0 139 aaKnown RBP8.29□□□□□ -1.08
SF3B3-204ENST00000563739 U3KQK5 164 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms