RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ZNF850A8MQ14 1090 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 TNFRSF11BO00300 401 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 ARPC2O15144 300 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 ANGPTL7O43827 346 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 GASTP01350 101 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 IFNGP01579 166 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 TFF1P04155 84 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 ACKR3P25106 362 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 LOXL3P58215 753 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 SHFQ7M4L6 423 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 OR6N2Q8NGY6 317 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 OR4Q3Q8NH05 313 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 MRAPQ8TCY5 172 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 ZNF222Q9UK12 451 aa15.18■□□□□ 0.02
NME3-204ENST00000563498 IGKV1D-17A0A075B6S4 117 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 RIIAD1A6NNX1 92 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 ZNF3P17036 446 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 GLRA1P23415 457 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 EMX1Q04741 257 aaPredicted RBP15.17■□□□□ 0.02
NME3-204ENST00000563498 SAMD4BQ5PRF9 694 aaKnown RBP15.17■□□□□ 0.02
NME3-204ENST00000563498 KCTD8Q6ZWB6 473 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 ERI1Q8IV48 349 aaKnown RBP15.17■□□□□ 0.02
NME3-204ENST00000563498 OR4S1Q8NGB4 309 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 OR5K1Q8NHB7 308 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 HPSE2Q8WWQ2 592 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 RNF170Q96K19 258 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 FGF23Q9GZV9 251 aaPredicted RBP15.17■□□□□ 0.02
NME3-204ENST00000563498 BRD7Q9NPI1 651 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 NECAP2Q9NVZ3 263 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 LRP12Q9Y561 859 aa15.17■□□□□ 0.02
NME3-204ENST00000563498 MEGF11A6BM72 1044 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 CHST1O43916 411 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 CCNB2O95067 398 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 H2BFMP0C1H6 154 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 VSIG10L2P0DP72 767 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 PSG2P11465 335 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 GSTT1P30711 240 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 GABRA2P47869 451 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 KRT74Q7RTS7 529 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 TIGD4Q8IY51 512 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 ZDHHC23Q8IYP9 409 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 AQP11Q8NBQ7 271 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 ZNRF1Q8ND25 227 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 PIGCQ92535 297 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 SDSLQ96GA7 329 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 AMELYQ99218 206 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 HEXA-AS1Q9H8Q6 139 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 ELL3Q9HB65 397 aaPredicted RBP15.16■□□□□ 0.02
NME3-204ENST00000563498 CMC2Q9NRP2 79 aa15.16■□□□□ 0.02
NME3-204ENST00000563498 A0A1W2PPH5 198 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 MSX2P35548 267 aaPredicted RBP15.15■□□□□ 0.02
NME3-204ENST00000563498 OXLD1Q5BKU9 147 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.15■□□□□ 0.02
NME3-204ENST00000563498 FAM185AQ8N0U4 392 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 PGAM4Q8N0Y7 254 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 Q8N2B8 174 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 TMEM185AQ8NFB2 350 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 PIFOQ8TCI5 191 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 ITFG2Q969R8 447 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 HIST1H2AAQ96QV6 131 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 CDCA4Q9BXL8 241 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 DGCR6LQ9BY27 220 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 ARMC1Q9NVT9 282 aa15.15■□□□□ 0.02
NME3-204ENST00000563498 VGLL3A8MV65 326 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 FBXO24O75426 580 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 RHBDL1O75783 438 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 GLCEO94923 617 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 MAGEA2P43356 314 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 GPM6AP51674 278 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 GNG3P63215 75 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 SPATS1Q496A3 300 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 NDUFA11Q86Y39 141 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 MKXQ8IYA7 352 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 ZNF454Q8N9F8 522 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 OR4F17Q8NGA8 305 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 LYZL4Q96KX0 146 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 OR4F4Q96R69 305 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 OR51I2Q9H344 312 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 C19orf12Q9NSK7 152 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 SERTAD4Q9NUC0 356 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 RASL12Q9NYN1 266 aa15.14■□□□□ 0.01
NME3-204ENST00000563498 SOX14O95416 240 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 LYNP07948 512 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 PAICSP22234 425 aaKnown RBP15.13■□□□□ 0.01
NME3-204ENST00000563498 NSUN5P1Q3KNT7 163 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 CEACAM21Q3KPI0 293 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 THAP5Q7Z6K1 395 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 C11orf42Q8N5U0 333 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 OTOSQ8NHW6 89 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 ZNF671Q8TAW3 534 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 SGCDQ92629 289 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 CDRT15Q96T59 188 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 NIPAL2Q9H841 368 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 ZNF702PQ9H963 129 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 AURKAIP1Q9NWT8 199 aaPredicted RBP15.13■□□□□ 0.01
NME3-204ENST00000563498 NOTCH3Q9UM47 2321 aa15.13■□□□□ 0.01
NME3-204ENST00000563498 hCG_1809904A0A1W2PP81 198 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 A0A1W2PPE2 198 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 A0A1W2PR64 198 aa15.12■□□□□ 0.01
NME3-204ENST00000563498 A0A1W2PRV1 198 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms