RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 FAM185AQ8N0U4 392 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 IQCF1Q8N6M8 205 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 THEM6Q8WUY1 208 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 OR5P3Q8WZ94 311 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 TNFRSF14Q92956 283 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 SSX3Q99909 188 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 OR51V1Q9H2C8 321 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 ELL3Q9HB65 397 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-202ENST00000562722 CMC2Q9NRP2 79 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 NLKQ9UBE8 527 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 FBLN5Q9UBX5 448 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 SF3B6Q9Y3B4 125 aaKnown RBP10.62□□□□□ -0.71
SF3B3-202ENST00000562722 G3V4G9 280 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 SIGLEC5O15389 551 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 GLCEO94923 617 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 CST4P01036 141 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 LYNP07948 512 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 ACAA1P09110 424 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-202ENST00000562722 ATP6V1B2P21281 511 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 ACKR3P25106 362 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 GPM6AP51674 278 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 BEND2Q8NDZ0 799 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 OR5D13Q8NGL4 314 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 OR2T6Q8NHC8 308 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 ANGPTL6Q8NI99 470 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 RORBQ92753 470 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 CLPTM1LQ96KA5 538 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 DGCR6LQ9BY27 220 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 ARL8BQ9NVJ2 186 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 ACTR3BQ9P1U1 418 aa10.61□□□□□ -0.71
SF3B3-202ENST00000562722 SNX3O60493 162 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 SELENOFO60613 162 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 MAGEA2P43356 314 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 CAV3P56539 151 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 LRRC75BQ2VPJ9 315 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 SPATS1Q496A3 300 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 HIST2H2BDQ6DRA6 164 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 OR2T5Q6IEZ7 315 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 COMMD2Q86X83 199 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 KLHDC1Q8N7A1 406 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 ZNF454Q8N9F8 522 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 ZNRF1Q8ND25 227 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 OR10G2Q8NGC3 310 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 OR2T29Q8NH02 315 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 PPP1R35Q8TAP8 253 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 C17orf50Q8WW18 174 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 HPSE2Q8WWQ2 592 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 NKX3-1Q99801 234 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-202ENST00000562722 RAB18Q9NP72 206 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 VNN3Q9NY84 501 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 TAS2R1Q9NYW7 299 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 FOXJ3Q9UPW0 622 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 MAB21L2Q9Y586 359 aa10.6□□□□□ -0.71
SF3B3-202ENST00000562722 TET2Q6N021 2002 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-202ENST00000562722 IGKV1D-17A0A075B6S4 117 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 TRBV23-1A0A0A0MS06 115 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 ZNF732B4DXR9 585 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 PRR23D1E9PI22 279 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-202ENST00000562722 RHBDL1O75783 438 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 PRR23D2P0DMB1 279 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-202ENST00000562722 VSIG10L2P0DP72 767 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 PSMA6P60900 246 aaKnown RBP10.59□□□□□ -0.71
SF3B3-202ENST00000562722 RPS7P62081 194 aaKnown RBP10.59□□□□□ -0.71
SF3B3-202ENST00000562722 FAM98BQ52LJ0 330 aaKnown RBP10.59□□□□□ -0.71
SF3B3-202ENST00000562722 CEP78Q5JTW2 689 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 PLBD1Q6P4A8 553 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 C11orf88Q6PI97 169 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 THAP5Q7Z6K1 395 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 OR8B12Q8NGG6 310 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 OTOSQ8NHW6 89 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 LYZL4Q96KX0 146 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 NIPSNAP1Q9BPW8 284 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 FGF23Q9GZV9 251 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-202ENST00000562722 MAGIXQ9H6Y5 334 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 YY1AP1Q9H869 796 aa10.59□□□□□ -0.71
SF3B3-202ENST00000562722 A0A1W2PPH5 198 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 PRB2P02812 416 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-202ENST00000562722 OPN1MWP04001 364 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 OPN1MW2P0DN77 364 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 OPN1MW3P0DN78 364 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 PSG2P11465 335 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 COX7A1P24310 79 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 PAX6P26367 422 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 MAP2K3P46734 347 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 EFNB2P52799 333 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 LGALS4P56470 323 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 GNG3P63215 75 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 FAM189A2Q15884 450 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 BEAN1Q3B7T3 259 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 PLCXD3Q63HM9 321 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 KRT77Q7Z794 578 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 DHFR2Q86XF0 187 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 MKXQ8IYA7 352 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 ZNF671Q8TAW3 534 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 GIPC3Q8TF64 312 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 NPFFR1Q9GZQ6 430 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 NIPAL2Q9H841 368 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 C19orf12Q9NSK7 152 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 LAMP5Q9UJQ1 280 aa10.58□□□□□ -0.72
SF3B3-202ENST00000562722 TCRBV5S2A0A599 114 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms