RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 BEX1Q9HBH7 125 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 MGAT4CQ9UBM8 478 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 KCNE5Q9UJ90 142 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 SLC22A13Q9Y226 551 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 CACNA1HO95180 2353 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 CKAP5Q14008 2032 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 LOC100509620A0A075B734 347 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 C5orf49A4QMS7 147 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 NKX6-3A6NJ46 265 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 NCR1O76036 304 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 NXPH2O95156 264 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 ZNF250P15622 560 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 PSMB1P20618 241 aaKnown RBP6.71□□□□□ -1.34
TCF4-216ENST00000562680 PCMT1P22061 227 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 OPRM1P35372 400 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 HCCSP53701 268 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 CAV3P56539 151 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 TMPRSS3P57727 454 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 RAB1AP62820 205 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 SRPXP78539 464 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 PMPCAQ10713 525 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 GNMTQ14749 295 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 C1QL3Q5VWW1 255 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 KCTD9Q7L273 389 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 OR2W3Q7Z3T1 314 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 BPIFB2Q8N4F0 458 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 NFAM1Q8NET5 270 aaPredicted RBP6.71□□□□□ -1.34
TCF4-216ENST00000562680 CD300LFQ8TDQ1 290 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 ISG20L2Q9H9L3 353 aaKnown RBP6.71□□□□□ -1.34
TCF4-216ENST00000562680 PPP1R3CQ9UQK1 317 aa6.71□□□□□ -1.34
TCF4-216ENST00000562680 MAGEB4O15481 346 aaPredicted RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 FABP7O15540 132 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 SLC25A17O43808 307 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 EPPINO95925 133 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 GSTP1P09211 210 aaKnown RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 ATF1P18846 271 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 MPGP29372 298 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 MAGEA5P43359 124 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 DLX5P56178 289 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 FMODQ06828 376 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 FABP9Q0Z7S8 132 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 IKZF1Q13422 519 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 EXOSC2Q13868 293 aaKnown RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 KIAA0141Q14154 515 aaPredicted RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 OR8G1Q15617 311 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 HMGN3Q15651 99 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 DMKNQ6E0U4 476 aaPredicted RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 TRAPPC6BQ86SZ2 158 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 PLPP7Q8NBV4 271 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 PXT1Q8NFP0 134 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 OR2T35Q8NGX2 323 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 PIGTQ969N2 578 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 ASCL3Q9NQ33 180 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 MRPS18CQ9Y3D5 142 aaKnown RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 CHST2Q9Y4C5 530 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 POMT1Q9Y6A1 747 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 V9GYS6 101 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 SC5DO75845 299 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 TOXO94900 526 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 TMIGD3P0DMS9 266 aaPredicted RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 ANXA7P20073 488 aaKnown RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 SULF2Q8IWU5 870 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 MRPL41Q8IXM3 137 aaKnown RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 Q8IYB0 196 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 C1orf87Q8N0U7 546 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 NOL4LQ96MY1 436 aaPredicted RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 RHNO1Q9BSD3 238 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 NICN1Q9BSH3 213 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 ZNF471Q9BX82 626 aaPredicted RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 AHRRA9YTQ3 701 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 J3KRW8 73 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 NDUFA2O43678 99 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 IL2RGP31785 369 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 CLDN12P56749 244 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 TMPRSS7Q7RTY8 843 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 TMEM251Q8N6I4 163 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 WDFY2Q96P53 400 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 RPS10-NUDT3A0A1W2PQS6 291 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 TMEM229AB2RXF0 380 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 WDR1O75083 606 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 DHRS3O75911 302 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 EPXP11678 715 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 ZNF32P17041 273 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 DTYMKP23919 212 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 SOX18P35713 384 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 RPS10P46783 165 aaKnown RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 EVX1P49640 407 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 RPS27AP62979 156 aaKnown RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 UBA52P62987 128 aaKnown RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 WDR38Q5JTN6 314 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 LEMD1Q68G75 181 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 SMIM12Q96EX1 92 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 ESRP2Q9H6T0 727 aaKnown RBP6.7□□□□□ -1.34
TCF4-216ENST00000562680 SLC2A9Q9NRM0 540 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 TREM2Q9NZC2 230 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 DUSP13Q9UII6 198 aa6.7□□□□□ -1.34
TCF4-216ENST00000562680 ONECUT2O95948 504 aa6.69□□□□□ -1.34
TCF4-216ENST00000562680 RRASP10301 218 aa6.69□□□□□ -1.34
TCF4-216ENST00000562680 APEX1P27695 318 aaKnown RBP6.69□□□□□ -1.34
TCF4-216ENST00000562680 TMEM200AQ86VY9 491 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms