RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 ZNF732B4DXR9 585 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 TNFRSF13BO14836 293 aaPredicted RBP14.79□□□□□ -0.04
CMTM3-204ENST00000562357 GPR37O15354 613 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 PLATP00750 562 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 OR2T7P0C7T2 308 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 MFGE8Q08431 387 aaPredicted RBP14.79□□□□□ -0.04
CMTM3-204ENST00000562357 TMED1Q13445 227 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 LRRC10Q5BKY1 277 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 CEP78Q5JTW2 689 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 ZNF684Q5T5D7 378 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 C9orf139Q6ZV77 190 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 MOB3CQ70IA8 216 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 BTN2A1Q7KYR7 527 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 BCL6BQ8N143 479 aaPredicted RBP14.79□□□□□ -0.04
CMTM3-204ENST00000562357 YIPF7Q8N8F6 280 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 OR10H4Q8NGA5 316 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 OR2T27Q8NH04 317 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 ZNF671Q8TAW3 534 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 ZDHHC16Q969W1 377 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 SLC25A28Q96A46 364 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 TBX5Q99593 518 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 RASSF4Q9H2L5 321 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 ESM1Q9NQ30 184 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 OR52A1Q9UKL2 312 aa14.79□□□□□ -0.04
CMTM3-204ENST00000562357 DNAJC9-AS1A6NH13 148 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 PRR32B1ATL7 298 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 TTRP02766 147 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 FAHP16930 419 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 GLRA1P23415 457 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 PRTN3P24158 256 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 POLR2IP36954 125 aaKnown RBP14.78□□□□□ -0.04
CMTM3-204ENST00000562357 IKZF1Q13422 519 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 KPNB1Q14974 876 aaKnown RBP14.78□□□□□ -0.04
CMTM3-204ENST00000562357 FAM76BQ5HYJ3 339 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 FAM220AQ7Z4H9 259 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 CMTM4Q8IZR5 234 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 C3orf56Q8N813 242 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 OR5A2Q8NGI9 324 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 WDFY2Q96P53 400 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 DNTTIP1Q9H147 329 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 PLEKHA1Q9HB21 404 aa14.78□□□□□ -0.04
CMTM3-204ENST00000562357 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.78□□□□□ -0.04
CMTM3-204ENST00000562357 DOCK11Q5JSL3 2073 aa14.77□□□□□ -0.04
CMTM3-204ENST00000562357 TMEM89A2RUT3 159 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.77□□□□□ -0.05
CMTM3-204ENST00000562357 EBAG9O00559 213 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 AKR7A2O43488 359 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 RPP14O95059 124 aaKnown RBP14.77□□□□□ -0.05
CMTM3-204ENST00000562357 NRASP01111 189 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 PDCD1Q15116 288 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 STUMQ69YW2 141 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 PLEKHG7Q6ZR37 379 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 KRT74Q7RTS7 529 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 ELMOD2Q8IZ81 293 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 FAM216BQ8N7L0 139 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 TRUB1Q8WWH5 349 aaKnown RBP14.77□□□□□ -0.05
CMTM3-204ENST00000562357 GATAD2BQ8WXI9 593 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 TMIGD2Q96BF3 282 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 MED30Q96HR3 178 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 RAB3IPQ96QF0 476 aaPredicted RBP14.77□□□□□ -0.05
CMTM3-204ENST00000562357 ADI1Q9BV57 179 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 SNTG1Q9NSN8 517 aa14.77□□□□□ -0.05
CMTM3-204ENST00000562357 MRM2Q9UI43 246 aaKnown RBP14.77□□□□□ -0.05
CMTM3-204ENST00000562357 RPUSD1Q9UJJ7 312 aaKnown RBP14.77□□□□□ -0.05
CMTM3-204ENST00000562357 A0A1B0GVI7 797 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 SNTNA6NMZ2 147 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 EI24O14681 340 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 MAGEB4O15481 346 aaPredicted RBP14.76□□□□□ -0.05
CMTM3-204ENST00000562357 IGLV3-1P01715 115 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 SFTPBP07988 381 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 COMPP49747 757 aaPredicted RBP14.76□□□□□ -0.05
CMTM3-204ENST00000562357 IL13RA1P78552 427 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 CLVS2Q5SYC1 327 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 ATPAF1Q5TC12 328 aaPredicted RBP14.76□□□□□ -0.05
CMTM3-204ENST00000562357 HAGHLQ6PII5 290 aaPredicted RBP14.76□□□□□ -0.05
CMTM3-204ENST00000562357 BRD3OSQ6XYD6 125 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 ZNF573Q86YE8 665 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 OR5T2Q8NGG2 359 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 H1FXQ92522 213 aaKnown RBP14.76□□□□□ -0.05
CMTM3-204ENST00000562357 EME1Q96AY2 570 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 DUX5Q96PT3 197 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 WDR13Q9H1Z4 485 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 OR51I2Q9H344 312 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 CNTD2Q9H8S5 307 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 ONECUT1Q9UBC0 465 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 NLKQ9UBE8 527 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 POLDIP2Q9Y2S7 368 aa14.76□□□□□ -0.05
CMTM3-204ENST00000562357 A0A1W2PQL4 384 aaPredicted RBP14.75□□□□□ -0.05
CMTM3-204ENST00000562357 METTL15A6NJ78 407 aa14.75□□□□□ -0.05
CMTM3-204ENST00000562357 DHRS7CA6NNS2 312 aa14.75□□□□□ -0.05
CMTM3-204ENST00000562357 CLDN34H7C241 214 aa14.75□□□□□ -0.05
CMTM3-204ENST00000562357 DLGAP1O14490 977 aa14.75□□□□□ -0.05
CMTM3-204ENST00000562357 SRSF10O75494 262 aaKnown RBP14.75□□□□□ -0.05
CMTM3-204ENST00000562357 SULT1C4O75897 302 aa14.75□□□□□ -0.05
CMTM3-204ENST00000562357 APOL3O95236 402 aa14.75□□□□□ -0.05
CMTM3-204ENST00000562357 ALPLP05186 524 aa14.75□□□□□ -0.05
CMTM3-204ENST00000562357 GABRA2P47869 451 aa14.75□□□□□ -0.05
CMTM3-204ENST00000562357 ALDH3A2P51648 485 aa14.75□□□□□ -0.05
CMTM3-204ENST00000562357 ARF6P62330 175 aa14.75□□□□□ -0.05
CMTM3-204ENST00000562357 FOXL1Q12952 345 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms