RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 FOXJ3Q9UPW0 622 aa10.23□□□□□ -0.77
IRF9-211ENST00000560852 DHDHQ9UQ10 334 aa10.23□□□□□ -0.77
IRF9-211ENST00000560852 POLQO75417 2590 aa10.23□□□□□ -0.77
IRF9-211ENST00000560852 AKAP9Q99996 3911 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 AKAP6Q13023 2319 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 A0A096LNT2 108 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 LRP5LA4QPB2 252 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 ZNF879B4DU55 563 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 OCM2P0CE71 109 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 SLC25A16P16260 332 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 ATF1P18846 271 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 MAPK3P27361 379 aaPredicted RBP10.22□□□□□ -0.77
IRF9-211ENST00000560852 THBS2P35442 1172 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 PDLIM4P50479 330 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 CNN3Q15417 329 aaKnown RBP10.22□□□□□ -0.77
IRF9-211ENST00000560852 SSX1Q16384 188 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 TSTQ16762 297 aaKnown RBP10.22□□□□□ -0.77
IRF9-211ENST00000560852 ODF4Q2M2E3 257 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 HFEQ30201 348 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 ARMCX4Q5H9R4 360 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 CRIP3Q6Q6R5 217 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 LYPD6Q86Y78 171 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 ZNF573Q86YE8 665 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 OR10AD1Q8NGE0 317 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 OR13C3Q8NGS6 347 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 OR8S1Q8NH09 359 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 HPS1Q92902 700 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 MUL1Q969V5 352 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 TMEM106AQ96A25 262 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 PERPQ96FX8 193 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 RNF170Q96K19 258 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 DERL3Q96Q80 235 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 PKIBQ9C010 78 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 PPP1R3EQ9H7J1 279 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 PLEKHA1Q9HB21 404 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 RHOFQ9HBH0 211 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 NEK6Q9HC98 313 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 TMEM106BQ9NUM4 274 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 PPP1R3CQ9UQK1 317 aa10.22□□□□□ -0.77
IRF9-211ENST00000560852 SETXQ7Z333 2677 aaKnown RBP10.21□□□□□ -0.77
IRF9-211ENST00000560852 USF3Q68DE3 2245 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 TMEM178BH3BS89 294 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 CCRL2O00421 344 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 TNFRSF13BO14836 293 aaPredicted RBP10.21□□□□□ -0.77
IRF9-211ENST00000560852 PIN1P1O15428 100 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 SULT1B1O43704 296 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 SSX4O60224 188 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 LMX1BO60663 402 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 UCHL1P09936 223 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 FGF9P31371 208 aaPredicted RBP10.21□□□□□ -0.77
IRF9-211ENST00000560852 ART1P52961 327 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 GP2P55259 537 aaKnown RBP10.21□□□□□ -0.77
IRF9-211ENST00000560852 CLEC12BQ2HXU8 276 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 ACSM3Q53FZ2 586 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 LIPKQ5VXJ0 399 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 CLEC2AQ6UVW9 174 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 ASCL4Q6XD76 172 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 TMEM91Q6ZNR0 172 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 KCTD8Q6ZWB6 473 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 Q8NFD4 153 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 FAM168AQ92567 244 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 C1orf159Q96HA4 380 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 FN3KRPQ9HA64 309 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 SLC7A11Q9UPY5 501 aa10.21□□□□□ -0.77
IRF9-211ENST00000560852 TRDV1A0A1B0GX56 115 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 MEGF11A6BM72 1044 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 MAGEA13PA6NCF6 341 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 LRRC30A6NM36 301 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 INMTO95050 263 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 ZNF20P17024 532 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 TGFBR2P37173 567 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 NR4A2P43354 598 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 RBP2P50120 134 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 ERVK11-1P61568 191 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 LOXL1Q08397 574 aaPredicted RBP10.2□□□□□ -0.78
IRF9-211ENST00000560852 IL24Q13007 206 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 MPPED2Q15777 294 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 TMEM155Q4W5P6 130 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 Q5PR19 223 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 TEX36Q5VZQ5 186 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 PLCXD3Q63HM9 321 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 WDR82Q6UXN9 313 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 GDPGP1Q6ZNW5 385 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 LHFPL2Q6ZUX7 228 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 MOB3CQ70IA8 216 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 LRRC28Q86X40 367 aaPredicted RBP10.2□□□□□ -0.78
IRF9-211ENST00000560852 SAXO1Q8IYX7 474 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 C1orf87Q8N0U7 546 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 ZNF525Q8N782 197 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 ZFP41Q8N8Y5 198 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 ZSCAN4Q8NAM6 433 aaPredicted RBP10.2□□□□□ -0.78
IRF9-211ENST00000560852 AQP3Q92482 292 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 C12orf43Q96C57 262 aaKnown RBP10.2□□□□□ -0.78
IRF9-211ENST00000560852 TMEM138Q9NPI0 162 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 RASL12Q9NYN1 266 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 RNF7Q9UBF6 113 aa10.2□□□□□ -0.78
IRF9-211ENST00000560852 IGKV1-27A0A075B6S5 117 aa10.19□□□□□ -0.78
IRF9-211ENST00000560852 SRRM5B3KS81 715 aa10.19□□□□□ -0.78
IRF9-211ENST00000560852 ZNF732B4DXR9 585 aa10.19□□□□□ -0.78
IRF9-211ENST00000560852 CLDN25C9JDP6 229 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms