RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 NBPF19A0A087WUL8 3843 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 PLCE1Q9P212 2302 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 IGKV1-27A0A075B6S5 117 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 A0A0G2JK05 382 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 A0A0U1RQV5 110 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 TRDV1A0A1B0GX56 115 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 ZSCAN5BA6NJL1 495 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 CD300LBA8K4G0 201 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 ZNF850A8MQ14 1090 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 MLNRO43193 412 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 XRCC2O43543 280 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 TIMM8AO60220 97 aaPredicted RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 CDRT1O95170 752 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 PLATP00750 562 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 UCHL1P09936 223 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 OR4A8P0C604 315 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 CALCBP10092 127 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 SLC2A2P11168 524 aaPredicted RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 CA6P23280 308 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 PTAFRP25105 342 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 PSMA1P25786 263 aaKnown RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 SDC2P34741 201 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 MMP15P51511 669 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 CLDN12P56749 244 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 MALLQ13021 153 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 MRPL28Q13084 256 aaKnown RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 PLA2G7Q13093 441 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 PRDX4Q13162 271 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 MADCAM1Q13477 382 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 OR8B8Q15620 311 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 UBE2V2Q15819 145 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 ADIPOQQ15848 244 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 CNPY1Q3B7I2 92 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 Q499Y3 187 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 ZNF672Q499Z4 452 aaPredicted RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 YIF1BQ5BJH7 314 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 BEX5Q5H9J7 111 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 TMEM244Q5VVB8 128 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 PRAMEF6Q5VXH4 476 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 PLCXD3Q63HM9 321 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 RGS7BPQ6MZT1 257 aaPredicted RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 CRIP3Q6Q6R5 217 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 UNQ9370/PRO34162Q6UXP9 181 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 FBXW12Q6X9E4 464 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 ZNF704Q6ZNC4 412 aaPredicted RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 MOB3CQ70IA8 216 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 RHOUQ7L0Q8 258 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 DOK3Q7L591 496 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 WDR86Q86TI4 376 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 RTN4RL2Q86UN3 420 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 TGIF2LYQ8IUE0 185 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 Q8N1Y9 231 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 SEMA6DQ8NFY4 1073 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 OR52N4Q8NGI2 321 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 OR52H1Q8NGJ2 320 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 OR5D18Q8NGL1 313 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 HPSE2Q8WWQ2 592 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 PIGCQ92535 297 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 AKAP1Q92667 903 aaKnown RBP eCLIP4.44□□□□□ -1.7
SPG11-220ENST00000559933 NRGNQ92686 78 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 SPSB4Q96A44 273 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 LRRC46Q96FV0 321 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 DACH2Q96NX9 599 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 PAPOLGQ9BWT3 736 aaKnown RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 BARHL1Q9BZE3 327 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 TPK1Q9H3S4 243 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 HEATR1Q9H583 2144 aaKnown RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 UBTD1Q9HAC8 227 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 PLEKHA1Q9HB21 404 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 CA10Q9NS85 328 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 SNTG1Q9NSN8 517 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 TBCCD1Q9NVR7 557 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 TREM2Q9NZC2 230 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 RSL24D1Q9UHA3 163 aaKnown RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 PURGQ9UJV8 347 aaKnown RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 SSR3Q9UNL2 185 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 AK6Q9Y3D8 172 aaKnown RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 RNF115Q9Y4L5 304 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 CSMD2Q7Z408 3487 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 PKDREJQ9NTG1 2253 aa4.44□□□□□ -1.7
SPG11-220ENST00000559933 USP9YO00507 2555 aaPredicted RBP4.44□□□□□ -1.7
SPG11-220ENST00000559933 ICE1Q9Y2F5 2266 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 DOPEY2Q9Y3R5 2298 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 CRYBG3Q68DQ2 2970 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 ZNF816-ZNF321PA0A0X1KG74 233 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 FAM230AA0A1W2PPH8 454 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 A6NNC1 897 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 F5H5P2 479 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 CASKO14936 926 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 SPRY3O43610 288 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 GMDSO60547 372 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 NOL3O60936 208 aaKnown RBP4.43□□□□□ -1.7
SPG11-220ENST00000559933 LY6HO94772 140 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 APOC1P02654 83 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 TFF1P04155 84 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 ISG15P05161 165 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 CD1AP06126 327 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 SOD3P08294 240 aa4.43□□□□□ -1.7
SPG11-220ENST00000559933 ZNF182P17025 639 aaPredicted RBP4.43□□□□□ -1.7
SPG11-220ENST00000559933 IGFBP3P17936 291 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms