RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 MAPK3P27361 379 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 CFHR2P36980 270 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 SOX2P48431 317 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 ZNF181Q2M3W8 571 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 GDPGP1Q6ZNW5 385 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 TSEN15Q8WW01 171 aaKnown RBP12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 PIGCQ92535 297 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 DVL3Q92997 716 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 TMIGD2Q96BF3 282 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 ORAI1Q96D31 301 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 OR2V2Q96R30 315 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 RAB1BQ9H0U4 201 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 CXXC4Q9H2H0 198 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 CXorf56Q9H5V9 222 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 PLEKHA1Q9HB21 404 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 DYNLRB1Q9NP97 96 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 NOX4Q9NPH5 578 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 USF3Q68DE3 2245 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 SHISA3A0PJX4 238 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 OR5B21A6NL26 309 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 TMEM210A6NLX4 147 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 SPRY3O43610 288 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 IGHV4-39P01824 125 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 ACAA1P09110 424 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 CD36P16671 472 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 MPZP25189 248 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 GNALP38405 381 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 PMELP40967 661 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 RPL5P46777 297 aaKnown RBP12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 EFNA4P52798 201 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 ZNF154Q13106 437 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 OR8G1Q15617 311 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 FAM27D1Q5T7N8 215 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 SLC16A12Q6ZSM3 486 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 LRRTM1Q86UE6 522 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 OR2Z1Q8NG97 314 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 OR1M1Q8NGA1 313 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 OR51A2Q8NGJ7 313 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 TMEM203Q969S6 136 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 ERGIC1Q969X5 290 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 OR51I2Q9H344 312 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 GCM1Q9NP62 436 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 GPR173Q9NS66 373 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 STUB1Q9UNE7 303 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 PLEKHA6Q9Y2H5 1048 aa12.52□□□□□ -0.41
SNRPA1-207ENST00000559309 TRAV1-2A0A0B4J238 106 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 FSTL3O95633 263 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 ZNF20P17024 532 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 ADRA2CP18825 462 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 GADD45AP24522 165 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 AZGP1P25311 298 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 CFPP27918 469 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 PTH2RP49190 550 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 FUT6P51993 359 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 GNG3P63215 75 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 CCL8P80075 99 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 TNFAIP6P98066 277 aaPredicted RBP12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 CEP78Q5JTW2 689 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 RNF144BQ7Z419 303 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 CEACAM19Q7Z692 300 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 KRTAP1-3Q8IUG1 177 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 CDH26Q8IXH8 852 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 OR13C9Q8NGT0 318 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 ITLN1Q8WWA0 313 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 GFI1Q99684 422 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 MICU1Q9BPX6 476 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 RTL8AQ9BWD3 113 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 OR51E2Q9H255 320 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 TPK1Q9H3S4 243 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 C14orf119Q9NWQ9 140 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 TXNL4BQ9NX01 149 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 TAS2R4Q9NYW5 299 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 EDARQ9UNE0 448 aa12.51□□□□□ -0.41
SNRPA1-207ENST00000559309 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 TRIM64BA6NI03 449 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 ANXA2P2A6NMY6 339 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 LHBP01229 141 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 SRMP19623 302 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 SRP9P49458 86 aaKnown RBP12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 ZP1P60852 638 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 MZT1Q08AG7 82 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 CNN3Q15417 329 aaKnown RBP12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 MPPED2Q15777 294 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 DMRTC1Q5HYR2 192 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 PLCXD3Q63HM9 321 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 ASCL4Q6XD76 172 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 MOB3CQ70IA8 216 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 ANKRD13BQ86YJ7 626 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 YIPF5Q969M3 257 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 FUNDC2Q9BWH2 189 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 SAP30LQ9HAJ7 183 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 SCOCQ9UIL1 159 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 ITPR3Q14573 2671 aa12.5□□□□□ -0.41
SNRPA1-207ENST00000559309 DYSFO75923 2080 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 A0A1W2PPK0 400 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 LRP5LA4QPB2 252 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 ZNF732B4DXR9 585 aa12.49□□□□□ -0.41
SNRPA1-207ENST00000559309 NOS1APO75052 506 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms