RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 ZNF101Q8IZC7 436 aa13.46□□□□□ -0.25
CDC42BPB-203ENST00000558867 MS4A15Q8N5U1 240 aa13.46□□□□□ -0.25
CDC42BPB-203ENST00000558867 ZNF454Q8N9F8 522 aa13.46□□□□□ -0.25
CDC42BPB-203ENST00000558867 ZNF511Q8NB15 262 aa13.46□□□□□ -0.25
CDC42BPB-203ENST00000558867 OTOSQ8NHW6 89 aa13.46□□□□□ -0.25
CDC42BPB-203ENST00000558867 ZDHHC16Q969W1 377 aa13.46□□□□□ -0.25
CDC42BPB-203ENST00000558867 PELI1Q96FA3 418 aa13.46□□□□□ -0.25
CDC42BPB-203ENST00000558867 C1orf147Q96MC9 270 aaPredicted RBP13.46□□□□□ -0.25
CDC42BPB-203ENST00000558867 KCTD7Q96MP8 289 aa13.46□□□□□ -0.25
CDC42BPB-203ENST00000558867 ZNF48Q96MX3 618 aaPredicted RBP13.46□□□□□ -0.25
CDC42BPB-203ENST00000558867 TUBG2Q9NRH3 451 aa13.46□□□□□ -0.25
CDC42BPB-203ENST00000558867 J3QLW9 94 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 IFNL4K9M1U5 179 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 TIMM23O14925 209 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 SLC16A7O60669 478 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 KHDRBS3O75525 346 aaKnown RBP13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZNF19P17023 458 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZNF32P17041 273 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 SOX6P35712 828 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 MDH2P40926 338 aaKnown RBP13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 FABP5Q01469 135 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 CDK5R1Q15078 307 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 SGCAQ16586 387 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZNF404Q494X3 552 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZNF283Q8N7M2 679 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 S100ZQ8WXG8 99 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 SMIM19Q96E16 107 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 PGLYRP3Q96LB9 341 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 RBP7Q96R05 134 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 MSL2Q9HCI7 577 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 EXOSC4Q9NPD3 245 aaKnown RBP13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 PPP1R3CQ9UQK1 317 aa13.45□□□□□ -0.26
CDC42BPB-203ENST00000558867 GABRPO00591 440 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 ABHD16AO95870 558 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 GPANK1O95872 356 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 SERPINA3P01011 423 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 TGFBR1P36897 503 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 WNT5AP41221 380 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 ENTPD1P49961 510 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 ROM1Q03395 351 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 PAX8Q06710 450 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 FDX2Q6P4F2 183 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 BRICD5Q6PL45 260 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 LYPD4Q6UWN0 246 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 SLC26A10Q8NG04 563 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 OR6Q1Q8NGQ2 317 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 PHYHIPQ92561 330 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 C4orf45Q96LM5 186 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 SLC30A2Q9BRI3 323 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 CDADC1Q9BWV3 514 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 PALMDQ9NP74 551 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 MRPL22Q9NWU5 206 aaKnown RBP13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 KCNG2Q9UJ96 466 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 LAMP5Q9UJQ1 280 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 TIMM10BQ9Y5J6 103 aa13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 SIRT4Q9Y6E7 314 aaPredicted RBP13.44□□□□□ -0.26
CDC42BPB-203ENST00000558867 TANC2Q9HCD6 1990 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 LOC100509620A0A075B734 347 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 VGLL3A8MV65 326 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 E9PI62 339 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 OMGP23515 440 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 HCCSP53701 268 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 BPIFB3P59826 476 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 PSG4Q00888 419 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 DBPQ10586 325 aaPredicted RBP13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 KCNMB1Q16558 191 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZNF829Q3KNS6 432 aaPredicted RBP13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 TP53I3Q53FA7 332 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 FAM27BQ5VT28 67 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 SLC18B1Q6NT16 456 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 DEGS2Q6QHC5 323 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 TMEM91Q6ZNR0 172 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 DPY19L4Q7Z388 723 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 FAM220AQ7Z4H9 259 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 OR2Z1Q8NG97 314 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 OR6N2Q8NGY6 317 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 AKR7LQ8NHP1 331 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 MCFD2Q8NI22 146 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 SLC25A46Q96AG3 418 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 SSBP3Q9BWW4 388 aaPredicted RBP13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 RNF167Q9H6Y7 350 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 IL19Q9UHD0 177 aa13.43□□□□□ -0.26
CDC42BPB-203ENST00000558867 TVP23AA6NH52 213 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 F5H0A9 414 aaPredicted RBP13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 ICMTO60725 284 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 GATBO75879 557 aaKnown RBP13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 KRT8P05787 483 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 CFL1P23528 166 aaKnown RBP13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 CDAP32320 146 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 CD80P33681 288 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 RAG2P55895 527 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 DCTN2Q13561 401 aaKnown RBP13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZMYND11Q15326 602 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 C22orf42Q6IC83 251 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 KCTD18Q6PI47 426 aaPredicted RBP13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 SLC25A47Q6Q0C1 308 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 RFPL4BQ6ZWI9 263 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 RHOUQ7L0Q8 258 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 GLB1L2Q8IW92 636 aa13.42□□□□□ -0.26
CDC42BPB-203ENST00000558867 ZFP41Q8N8Y5 198 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms