RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 Q5PR19 223 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 CLEC2AQ6UVW9 174 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 UTS2BQ765I0 119 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 YIPF5Q969M3 257 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 TECTBQ96PL2 329 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 GCM1Q9NP62 436 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 MYOZ1Q9NP98 299 aaPredicted RBP17.99■□□□□ 0.47
CASC4-204ENST00000557945 PDZD2O15018 2839 aa17.99■□□□□ 0.47
CASC4-204ENST00000557945 FAM230AA0A1W2PPH8 454 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 OR5B21A6NL26 309 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 TMEM210A6NLX4 147 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 CCRL2O00421 344 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 ATF1P18846 271 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 GABRA5P31644 462 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 PDLIM4P50479 330 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 MRPS11P82912 194 aaKnown RBP17.98■□□□□ 0.47
CASC4-204ENST00000557945 HNRNPA0Q13151 305 aaKnown RBP17.98■□□□□ 0.47
CASC4-204ENST00000557945 INSL4Q14641 139 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 MPPED2Q15777 294 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 CLEC12BQ2HXU8 276 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 SYT6Q5T7P8 510 aaPredicted RBP17.98■□□□□ 0.47
CASC4-204ENST00000557945 WDR86Q86TI4 376 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 TGIF2LYQ8IUE0 185 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 OR1M1Q8NGA1 313 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 ZNF420Q8TAQ5 688 aaPredicted RBP17.98■□□□□ 0.47
CASC4-204ENST00000557945 MUL1Q969V5 352 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 FN3KRPQ9HA64 309 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 DLL4Q9NR61 685 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 TAS2R4Q9NYW5 299 aa17.98■□□□□ 0.47
CASC4-204ENST00000557945 MAGEA13PA6NCF6 341 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 SMIM18P0DKX4 95 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 PSMA1P25786 263 aaKnown RBP17.97■□□□□ 0.47
CASC4-204ENST00000557945 MAPK3P27361 379 aaPredicted RBP17.97■□□□□ 0.47
CASC4-204ENST00000557945 ZNF154Q13106 437 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 TRAM1Q15629 374 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 SHEQ5VZ18 495 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 CEACAM19Q7Z692 300 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 THRSPQ92748 146 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 ORAI1Q96D31 301 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 DERL3Q96Q80 235 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 C1orf123Q9NWV4 160 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 NDUFB11Q9NX14 153 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 CKLFQ9UBR5 152 aa17.97■□□□□ 0.47
CASC4-204ENST00000557945 SF3B6Q9Y3B4 125 aaKnown RBP17.97■□□□□ 0.47
CASC4-204ENST00000557945 TRBV5-7A0A0A0MS05 114 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 IGKV1-9A0A0C4DH69 117 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 hCG_1807616A0A1W2PRN6 198 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 TRIM64CA6NLI5 447 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 SULT1B1O43704 296 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 RGS9O75916 674 aaPredicted RBP17.96■□□□□ 0.47
CASC4-204ENST00000557945 PTBP3O95758 552 aaKnown RBP17.96■□□□□ 0.47
CASC4-204ENST00000557945 CSF3P09919 207 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 IRF2P14316 349 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 PRKACBP22694 351 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 AZGP1P25311 298 aaKnown RBP17.96■□□□□ 0.47
CASC4-204ENST00000557945 RBMXP38159 391 aaKnown RBP17.96■□□□□ 0.47
CASC4-204ENST00000557945 GATA4P43694 442 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 FUT6P51993 359 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 GP2P55259 537 aaKnown RBP17.96■□□□□ 0.47
CASC4-204ENST00000557945 PPP3R1P63098 170 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 OR11L1Q8NGX0 322 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 FAM168AQ92567 244 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 RPL3LQ92901 407 aaKnown RBP17.96■□□□□ 0.47
CASC4-204ENST00000557945 ERGIC1Q969X5 290 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 BORCS8Q96FH0 119 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 CHODLQ9H9P2 273 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 NEK6Q9HC98 313 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 NOX4Q9NPH5 578 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 TMEM106BQ9NUM4 274 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 CSMD1Q96PZ7 3565 aa17.96■□□□□ 0.47
CASC4-204ENST00000557945 PQLC2LA1A4F0 135 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 LRP5LA4QPB2 252 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 LRRC30A6NM36 301 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 RP2O75695 350 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 RAB3AP20336 220 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 TGFBR2P37173 567 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 PMELP40967 661 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 DSCR9P59020 149 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 PRSS57Q6UWY2 283 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 UNQ9370/PRO34162Q6UXP9 181 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 ZNF826PQ6ZT77 177 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 SPSB1Q96BD6 273 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 MRPS26Q9BYN8 205 aaKnown RBP17.95■□□□□ 0.46
CASC4-204ENST00000557945 OR51I2Q9H344 312 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 DCAF16Q9NXF7 216 aa17.95■□□□□ 0.46
CASC4-204ENST00000557945 IFNL4K9M1U5 179 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 CDIPTO14735 213 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 PIN1P1O15428 100 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 PPIHO43447 177 aaKnown RBP17.94■□□□□ 0.46
CASC4-204ENST00000557945 HCKP08631 526 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 MTCP1P56278 107 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 FABP5Q01469 135 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 FAM76BQ5HYJ3 339 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 FAM27D1Q5T7N8 215 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 ASPHD2Q6ICH7 369 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 HAGHLQ6PII5 290 aaPredicted RBP17.94■□□□□ 0.46
CASC4-204ENST00000557945 ZNF573Q86YE8 665 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 SCCPDHQ8NBX0 429 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 DNAAF1Q8NEP3 725 aa17.94■□□□□ 0.46
CASC4-204ENST00000557945 HPS1Q92902 700 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 570.6 ms