RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ZNF391Q9UJN7 358 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PITPNC1Q9UKF7 332 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 FBXO7Q9Y3I1 522 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 KIF25-AS1Q9Y6Z4 181 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CC2D2AQ9P2K1 1620 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 STRCQ7RTU9 1775 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ABCC6O95255 1503 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 EHBP1L1Q8N3D4 1523 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 A0A1B0GVY2 172 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 LRRC30A6NM36 301 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SULT1C2O00338 296 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SLC31A1O15431 190 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 LCMT2O60294 686 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PLIN3O60664 434 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 RAD1O60671 282 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF354AO60765 605 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 MRPS14O60783 128 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PIAS1O75925 651 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 AQP8O94778 261 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 MPZL1O95297 269 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 HAND1O96004 215 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 TIMP1P01033 207 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 GYPCP04921 128 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SERPIND1P05546 499 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ALPIP09923 528 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 TSPAN19P0C672 248 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PNMTP11086 282 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ANXA3P12429 323 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 IFI30P13284 250 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 AKR1C4P17516 323 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SERPINA2P20848 420 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 IVDP26440 423 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 GNRHRP30968 328 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 DLSTP36957 453 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 HPCAL1P37235 193 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 BRCC3P46736 316 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 KLF3P57682 345 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PKIAP61925 76 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 RHOGP84095 191 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CKAP4Q07065 602 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 BST2Q10589 180 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SRSF6Q13247 344 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ORC2Q13416 577 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PRSS8Q16651 343 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 CYP51A1Q16850 503 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 MS4A13Q5J8X5 152 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 FAM120AOSQ5T036 256 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 FAM219BQ5XKK7 198 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 XKRXQ6PP77 449 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 C2orf66Q6UXQ4 117 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF546Q86UE3 836 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 APRG1Q8IVJ8 170 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 METTL13Q8N6R0 699 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 NECAB1Q8N987 351 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 OR4K2Q8NGD2 314 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 OR5L1Q8NGL2 311 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 OR10K1Q8NGX5 313 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 RNASE11Q8TAA1 199 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF420Q8TAQ5 688 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 LGALS14Q8TCE9 139 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM239Q8WW34 195 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 APH1BQ8WW43 257 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 C1orf54Q8WWF1 131 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PPWD1Q96BP3 646 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 RAB3CQ96E17 227 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 MED8Q96G25 268 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 LINC00052Q96N35 136 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 RSPO3Q9BXY4 272 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 BEX2Q9BXY8 128 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 MS4A8Q9BY19 250 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 TBL1XR1Q9BZK7 514 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PATZ1Q9HBE1 687 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 EML4Q9HC35 981 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PNO1Q9NRX1 252 aaKnown RBP1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SLC7A10Q9NS82 523 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 FGFR1OP2Q9NVK5 253 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 SLC7A11Q9UPY5 501 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 PSG8Q9UQ74 426 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ARL5AQ9Y689 179 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 IQGAP3Q86VI3 1631 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 GLI2P10070 1586 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 ADGRA3Q8IWK6 1321 aa1.29□□□□□ -2.2
HIF1A-212ENST00000557538 MROH2AA6NES4 1674 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 KBTBD11-OT1A0A1B0GTJ5 212 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 HIDE1A8MVS5 230 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 FAM25AB3EWG3 89 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 FAM25CB3EWG5 89 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 FAM25GB3EWG6 89 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 DISC1C4P0D8 188 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 H3BSA7 217 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 RFXANKO14593 260 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 MAGEB4O15481 346 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-212ENST00000557538 SERF1AO75920 110 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 GADD45GO95257 159 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CRYGDP07320 174 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 ATP6V1B2P21281 511 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 STOMP27105 288 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 AKR1C3P42330 323 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 PTGFRP43088 359 aa1.28□□□□□ -2.2
HIF1A-212ENST00000557538 CRISP1P54107 249 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms