RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MPC1Q9Y5U8 109 aa7.08□□□□□ -1.28
VRK1-206ENST00000557222 COMMD3-BMI1R4GMX3 469 aa7.08□□□□□ -1.28
VRK1-206ENST00000557222 IGHV3OR15-7A0A075B7D8 119 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 TRBV23-1A0A0A0MS06 115 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 hCG_38984A0A1B0GV85 526 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 TVP23AA6NH52 213 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 ANXA2P2A6NMY6 339 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 ZNF593O00488 134 aaPredicted RBP7.07□□□□□ -1.28
VRK1-206ENST00000557222 ACOT8O14734 319 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 FABP3P05413 133 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 HSD17B1P14061 328 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 H2AFXP16104 143 aaPredicted RBP7.07□□□□□ -1.28
VRK1-206ENST00000557222 AMY2BP19961 511 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 PYCR1P32322 319 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 SAA4P35542 130 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 GNALP38405 381 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 EFNB2P52799 333 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 TIGD6Q17RP2 521 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 SPATS1Q496A3 300 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 SLC35F1Q5T1Q4 408 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 ZNF788Q6ZQV5 615 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 RASSF6Q6ZTQ3 369 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 KRT74Q7RTS7 529 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 WDR86Q86TI4 376 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 PDZD9Q8IXQ8 264 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 SLC37A3Q8NCC5 494 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 RNF133Q8WVZ7 376 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 SGK3Q96BR1 496 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 REEP6Q96HR9 211 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 RTL8AQ9BWD3 113 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 NMNAT2Q9BZQ4 307 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 FN3KQ9H479 309 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 SIRT7Q9NRC8 400 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 CENPMQ9NSP4 180 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 ZNF391Q9UJN7 358 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 MAB21L2Q9Y586 359 aa7.07□□□□□ -1.28
VRK1-206ENST00000557222 TENM3Q9P273 2699 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 DHRS12A0PJE2 317 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 MEIOCA2RUB1 952 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 NKX6-3A6NJ46 265 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 CDIPTO14735 213 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 SIGLEC5O15389 551 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 TBX1O43435 398 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 CST4P01036 141 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 ACAA1P09110 424 aaPredicted RBP7.06□□□□□ -1.28
VRK1-206ENST00000557222 SPARCP09486 303 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 SLC2A1P11166 492 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 ANOS1P23352 680 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 HSD11B1P28845 292 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 RRM2P31350 389 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 RPS27P42677 84 aaKnown RBP7.06□□□□□ -1.28
VRK1-206ENST00000557222 CX3CR1P49238 355 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 MXRA7P84157 204 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 SHFQ7M4L6 423 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 PRSS45Q7RTY3 260 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 CPLX4Q7Z7G2 160 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 FAM216BQ8N7L0 139 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 PAPD5Q8NDF8 572 aaKnown RBP7.06□□□□□ -1.28
VRK1-206ENST00000557222 BVESQ8NE79 360 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 OR4C13Q8NGP0 309 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 ANGPTL6Q8NI99 470 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 ZNRF4Q8WWF5 429 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 PAPOLGQ9BWT3 736 aaKnown RBP7.06□□□□□ -1.28
VRK1-206ENST00000557222 CDCA4Q9BXL8 241 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 OR10A2Q9H208 303 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 PPA2Q9H2U2 334 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 ADA2Q9NZK5 511 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 DNAJB11Q9UBS4 358 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 SLC25A10Q9UBX3 287 aaPredicted RBP7.06□□□□□ -1.28
VRK1-206ENST00000557222 RHBDD3Q9Y3P4 386 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 LRP12Q9Y561 859 aa7.06□□□□□ -1.28
VRK1-206ENST00000557222 A0A1B0GW55 424 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 A0A1W2PPH5 198 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 G3V4G9 280 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 XPNPEP2O43895 674 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 IFNGP01579 166 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 ANXA2P07355 339 aaKnown RBP7.05□□□□□ -1.28
VRK1-206ENST00000557222 DUX4L2P0CJ85 424 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 DUX4L3P0CJ86 424 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 DUX4L4P0CJ87 422 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 DUX4L5P0CJ88 424 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 DUX4L6P0CJ89 424 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 DUX4L7P0CJ90 424 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 PSKH1P11801 424 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 SPI1P17947 270 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 CSNK2BP67870 215 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 EMX1Q04741 257 aaPredicted RBP7.05□□□□□ -1.28
VRK1-206ENST00000557222 DBPQ10586 325 aaPredicted RBP7.05□□□□□ -1.28
VRK1-206ENST00000557222 SF3A3Q12874 501 aaKnown RBP eCLIP7.05□□□□□ -1.28
VRK1-206ENST00000557222 LRRC75BQ2VPJ9 315 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 KLHL12Q53G59 568 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 SAMD4BQ5PRF9 694 aaKnown RBP7.05□□□□□ -1.28
VRK1-206ENST00000557222 LINC01590Q5TEZ4 76 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 ZNF770Q6IQ21 691 aaPredicted RBP7.05□□□□□ -1.28
VRK1-206ENST00000557222 CRIP3Q6Q6R5 217 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 DUX4L9Q6RFH8 374 aaPredicted RBP7.05□□□□□ -1.28
VRK1-206ENST00000557222 FGFRL1Q8N441 504 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 OR2T33Q8NG76 320 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 OR4S1Q8NGB4 309 aa7.05□□□□□ -1.28
VRK1-206ENST00000557222 OR51G2Q8NGK0 314 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms