RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 RASL12Q9NYN1 266 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 DNAJB11Q9UBS4 358 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 KLHDC2Q9Y2U9 406 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 POMT1Q9Y6A1 747 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 CENPVL3A0A0U1RRI6 287 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 A0A1B0GVI7 797 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 NDUFB3O43676 98 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 HCCSP53701 268 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 HOXA4Q00056 320 aaPredicted RBP10.42□□□□□ -0.74
SNX6-207ENST00000556303 POU4F2Q12837 409 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 STUMQ69YW2 141 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 ZNF788Q6ZQV5 615 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 C1orf122Q6ZSJ8 110 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 KCTD8Q6ZWB6 473 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 THAP5Q7Z6K1 395 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 CMTM4Q8IZR5 234 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 HPSE2Q8WWQ2 592 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 ST8SIA4Q92187 359 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 TBX15Q96SF7 602 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 CCL13Q99616 98 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 RASSF4Q9H2L5 321 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 OR51I2Q9H344 312 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 ACOXLQ9NUZ1 547 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 CLN6Q9NWW5 311 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 WARS2Q9UGM6 360 aaKnown RBP10.42□□□□□ -0.74
SNX6-207ENST00000556303 ENPP5Q9UJA9 477 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 MMP24Q9Y5R2 645 aa10.42□□□□□ -0.74
SNX6-207ENST00000556303 IGHV3OR15-7A0A075B7D8 119 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 IGHV3OR16-10A0A075B7F0 116 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 IGHV1-69DA0A0B4J2H0 117 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 NKX6-3A6NJ46 265 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 FCN3O75636 299 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 DHRS3O75911 302 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 IGHV1-69P01742 117 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 MRPL3P09001 348 aaKnown RBP10.41□□□□□ -0.74
SNX6-207ENST00000556303 CAV3P56539 151 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 ARF6P62330 175 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 TMED1Q13445 227 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 DEFB112Q30KQ8 113 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 ZNF322Q6U7Q0 402 aaPredicted RBP10.41□□□□□ -0.74
SNX6-207ENST00000556303 BRD3OSQ6XYD6 125 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 Q6ZSR3 168 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 SLC35F2Q8IXU6 374 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 TCEANCQ8N8B7 351 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 CCDC54Q8NEL0 328 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 ANGPTL6Q8NI99 470 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 OR51E1Q8TCB6 317 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 SSMEM1Q8WWF3 244 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 RPL3LQ92901 407 aaKnown RBP10.41□□□□□ -0.74
SNX6-207ENST00000556303 CENPNQ96H22 339 aaPredicted RBP10.41□□□□□ -0.74
SNX6-207ENST00000556303 DUX5Q96PT3 197 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 DCTN5Q9BTE1 182 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 SLITRK2Q9H156 845 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 PPP1R3EQ9H7J1 279 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 ADGRL4Q9HBW9 690 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 GPR84Q9NQS5 396 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 NLKQ9UBE8 527 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 IKZF2Q9UKS7 526 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 COPS3Q9UNS2 423 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 CAB39Q9Y376 341 aaPredicted RBP10.41□□□□□ -0.74
SNX6-207ENST00000556303 SNX5Q9Y5X3 404 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 R4GMQ9 66 aa10.41□□□□□ -0.74
SNX6-207ENST00000556303 ZNF732B4DXR9 585 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 ZNF670-ZNF695F2Z2N8 137 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 DLGAP1O14490 977 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 SIGLEC5O15389 551 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 HOXA3O43365 443 aaPredicted RBP10.4□□□□□ -0.74
SNX6-207ENST00000556303 SRSF10O75494 262 aaKnown RBP10.4□□□□□ -0.74
SNX6-207ENST00000556303 CIB2O75838 187 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 SFTPBP07988 381 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 ACAA1P09110 424 aaPredicted RBP10.4□□□□□ -0.74
SNX6-207ENST00000556303 OR2T7P0C7T2 308 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 GLRA1P23415 457 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 GPM6AP51674 278 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 CXCR4P61073 352 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 GUCA2AQ02747 115 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 COMMD2Q86X83 199 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 ELMOD2Q8IZ81 293 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 OR8J1Q8NGP2 316 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 OR2T27Q8NH04 317 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 TBC1D15Q8TC07 691 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 TRUB1Q8WWH5 349 aaKnown RBP10.4□□□□□ -0.74
SNX6-207ENST00000556303 GABARAPL3Q9BY60 117 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 UNKLQ9H9P5 680 aaKnown RBP10.4□□□□□ -0.74
SNX6-207ENST00000556303 PIGLQ9Y2B2 252 aa10.4□□□□□ -0.74
SNX6-207ENST00000556303 CMYA5Q8N3K9 4069 aa10.4□□□□□ -0.75
SNX6-207ENST00000556303 OR2AT4A6NND4 320 aa10.39□□□□□ -0.75
SNX6-207ENST00000556303 PRR32B1ATL7 298 aa10.39□□□□□ -0.75
SNX6-207ENST00000556303 LOC110117498-PIK3R3F6TDL0 507 aa10.39□□□□□ -0.75
SNX6-207ENST00000556303 M0R1W7 72 aa10.39□□□□□ -0.75
SNX6-207ENST00000556303 PSMD9O00233 223 aa10.39□□□□□ -0.75
SNX6-207ENST00000556303 AKR7A2O43488 359 aa10.39□□□□□ -0.75
SNX6-207ENST00000556303 MITFO75030 526 aaPredicted RBP10.39□□□□□ -0.75
SNX6-207ENST00000556303 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
SNX6-207ENST00000556303 SULT1C4O75897 302 aa10.39□□□□□ -0.75
SNX6-207ENST00000556303 NRASP01111 189 aa10.39□□□□□ -0.75
SNX6-207ENST00000556303 TTRP02766 147 aa10.39□□□□□ -0.75
SNX6-207ENST00000556303 AMY2BP19961 511 aa10.39□□□□□ -0.75
SNX6-207ENST00000556303 EPHA2P29317 976 aa10.39□□□□□ -0.75
SNX6-207ENST00000556303 HTR1FP30939 366 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms