RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 SLAMF9Q96A28 289 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 C14orf79Q96F83 325 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 SULT4A1Q9BR01 284 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 NIT2Q9NQR4 276 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 SSX5O60225 188 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 TSPAN15O95858 294 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 IGLV3-21P80748 117 aaPredicted RBP13.14□□□□□ -0.31
CUX1-215ENST00000556210 OR52H1Q8NGJ2 320 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 GPX7Q96SL4 187 aaPredicted RBP13.14□□□□□ -0.31
CUX1-215ENST00000556210 NOSIPQ9Y314 301 aaKnown RBP13.14□□□□□ -0.31
CUX1-215ENST00000556210 FAM96BQ9Y3D0 163 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 A0A1W2PR80 420 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 GLAP06280 429 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 ZNF44P15621 663 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 CD80P33681 288 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 PPA1Q15181 289 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 FAM189A2Q15884 450 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 ISXQ2M1V0 245 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 SPINK14Q6IE38 97 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 ZNF574Q6ZN55 896 aaPredicted RBP13.14□□□□□ -0.31
CUX1-215ENST00000556210 DOK3Q7L591 496 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 STRADBQ9C0K7 418 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 RASL12Q9NYN1 266 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 KCNK7Q9Y2U2 307 aa13.14□□□□□ -0.31
CUX1-215ENST00000556210 TRBV5-5A0A0J9YX44 114 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 TO15178 435 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 CPT2P23786 658 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 CYB561P49447 251 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 RTN4RL2Q86UN3 420 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 TMEM217Q8N7C4 229 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 PRMT8Q9NR22 394 aaPredicted RBP13.13□□□□□ -0.31
CUX1-215ENST00000556210 CLDN16Q9Y5I7 305 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 DIDO1Q9BTC0 2240 aaKnown RBP13.13□□□□□ -0.31
CUX1-215ENST00000556210 TMEM218A2RU14 115 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 HPP00738 406 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 CLDN15P56746 228 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 SPATA46Q5T0L3 261 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 BEND4Q6ZU67 534 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 LYG2Q86SG7 212 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 DEFB123Q8N688 67 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 PLPP5Q8NEB5 264 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 SEMA6DQ8NFY4 1073 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 PIGQQ9BRB3 760 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 METTL9Q9H1A3 318 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 LRFN1Q9P244 771 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 FER1L5A0AVI2 2057 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 ABHD16AO95870 558 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 C3AR1Q16581 482 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 GUCA2BQ16661 112 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 EXD3Q8N9H8 876 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 OR5M8Q8NGP6 311 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 C20orf24Q9BUV8 137 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 SCPEP1Q9HB40 452 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 PKDREJQ9NTG1 2253 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 LAMA1P25391 3075 aa13.13□□□□□ -0.31
CUX1-215ENST00000556210 OR8U9P0C7N5 309 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 RAB13P51153 203 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 TFAP2EQ6VUC0 442 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 KCNRGQ8N5I3 272 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 OR51F2Q8NH61 342 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 TERB2Q8NHR7 220 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 ZFP57Q9NU63 452 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 HS3ST1O14792 307 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 CHRM2P08172 466 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 TAS2R31P59538 309 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 FBXW12Q6X9E4 464 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 PGAP1Q75T13 922 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 RNF144BQ7Z419 303 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 LRRC75AQ8NAA5 344 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 TMEM229BQ8NBD8 167 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 CLEC1AQ8NC01 280 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 GPX8Q8TED1 209 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 ARRDC1-AS1Q9H2J1 176 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 PHF1O43189 567 aaPredicted RBP13.12□□□□□ -0.31
CUX1-215ENST00000556210 GP1BAP07359 652 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 PPIAP62937 165 aaKnown RBP13.12□□□□□ -0.31
CUX1-215ENST00000556210 SLC25A26Q70HW3 274 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 RDH5Q92781 318 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 DEFB127Q9H1M4 99 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 PURGQ9UJV8 347 aaKnown RBP13.12□□□□□ -0.31
CUX1-215ENST00000556210 VSIG4Q9Y279 399 aa13.12□□□□□ -0.31
CUX1-215ENST00000556210 KIAA1671Q9BY89 1806 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 PCDH15Q96QU1 1955 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 K7EPK0 472 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 IKZF1Q13422 519 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 PUSL1Q8N0Z8 303 aaKnown RBP13.11□□□□□ -0.31
CUX1-215ENST00000556210 FBXL14Q8N1E6 418 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 FAM71E2Q8N5Q1 922 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 REG4Q9BYZ8 158 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 ZNF814B7Z6K7 855 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 EIF1BO60739 113 aaKnown RBP13.11□□□□□ -0.31
CUX1-215ENST00000556210 MALLQ13021 153 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 LTC4SQ16873 150 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 KMT5CQ86Y97 462 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 CNEP1R1Q8N9A8 125 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 SLC25A43Q8WUT9 341 aaPredicted RBP13.11□□□□□ -0.31
CUX1-215ENST00000556210 RNF133Q8WVZ7 376 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 REEP6Q96HR9 211 aa13.11□□□□□ -0.31
CUX1-215ENST00000556210 OR14J1Q9UGF5 321 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms