RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PPP1R3CQ9UQK1 317 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 ITPR2Q14571 2701 aa6.48□□□□□ -1.37
TDP1-214ENST00000556063 ASH1LQ9NR48 2969 aaKnown RBP6.47□□□□□ -1.37
TDP1-214ENST00000556063 hCG_1807616A0A1W2PRN6 198 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 LRP5LA4QPB2 252 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 MEGF11A6BM72 1044 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 A6NIN4 97 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 ZNF732B4DXR9 585 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 H0YL77 283 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 SULT1B1O43704 296 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 CDC14BO60729 498 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 NDUFS7O75251 213 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 ARL6IP5O75915 188 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 RGS9O75916 674 aaPredicted RBP6.47□□□□□ -1.37
TDP1-214ENST00000556063 NCR1O76036 304 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 INMTO95050 263 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 PTBP3O95758 552 aaKnown RBP6.47□□□□□ -1.37
TDP1-214ENST00000556063 CYB5AP00167 134 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 GRPP07492 148 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 GALP22466 123 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 TGFBR2P37173 567 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 RANBP1P43487 201 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 RBP2P50120 134 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 GPM6AP51674 278 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 ATP1B3P54709 279 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 TMEM33P57088 247 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 MAB21L1Q13394 359 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 ZNF181Q2M3W8 571 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 TIMM50Q3ZCQ8 353 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 ACSM3Q53FZ2 586 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 CEP78Q5JTW2 689 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 Q5PR19 223 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 SYT6Q5T7P8 510 aaPredicted RBP6.47□□□□□ -1.37
TDP1-214ENST00000556063 LHFPL2Q6ZUX7 228 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 CEACAM19Q7Z692 300 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 OR13C9Q8NGT0 318 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 RGP1Q92546 391 aaPredicted RBP6.47□□□□□ -1.37
TDP1-214ENST00000556063 FAM168AQ92567 244 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 CCL17Q92583 94 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 RAB1CQ92928 201 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 TMEM203Q969S6 136 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 MUL1Q969V5 352 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 MRPS26Q9BYN8 205 aaKnown RBP6.47□□□□□ -1.37
TDP1-214ENST00000556063 SLITRK2Q9H156 845 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 CHODLQ9H9P2 273 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 TCF7L1Q9HCS4 588 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 TMEM138Q9NPI0 162 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 NDUFB11Q9NX14 153 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 ITGB1BP2Q9UKP3 347 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 FOXJ3Q9UPW0 622 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 POLDIP2Q9Y2S7 368 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 MED13LQ71F56 2210 aa6.47□□□□□ -1.37
TDP1-214ENST00000556063 TRBV5-7A0A0A0MS05 114 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 FAM230AA0A1W2PPH8 454 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 PQLC2LA1A4F0 135 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 TRIM64BA6NI03 449 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 TRIM64CA6NLI5 447 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 CLDN25C9JDP6 229 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 LMX1BO60663 402 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 GPX5O75715 221 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 ALDOBP05062 364 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 HCKP08631 526 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 JUNBP17275 347 aaPredicted RBP6.46□□□□□ -1.38
TDP1-214ENST00000556063 FSTP19883 344 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 AZGP1P25311 298 aaKnown RBP6.46□□□□□ -1.38
TDP1-214ENST00000556063 GPR6P46095 362 aaPredicted RBP6.46□□□□□ -1.38
TDP1-214ENST00000556063 MTCP1P56278 107 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 RPS11P62280 158 aaKnown RBP eCLIP6.46□□□□□ -1.38
TDP1-214ENST00000556063 RPS25P62851 125 aaKnown RBP6.46□□□□□ -1.38
TDP1-214ENST00000556063 ZNF154Q13106 437 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 DOC2BQ14184 412 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 UBE2V2Q15819 145 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 CLEC12BQ2HXU8 276 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 HSD17B12Q53GQ0 312 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 FAM76BQ5HYJ3 339 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 PRAMEF6Q5VXH4 476 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 HAGHLQ6PII5 290 aaPredicted RBP6.46□□□□□ -1.38
TDP1-214ENST00000556063 UNQ9370/PRO34162Q6UXP9 181 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 MOGAT3Q86VF5 341 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 ZNF525Q8N782 197 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 PNLDC1Q8NA58 520 aaKnown RBP6.46□□□□□ -1.38
TDP1-214ENST00000556063 OR1M1Q8NGA1 313 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 OR13C5Q8NGS8 318 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 TRMT10AQ8TBZ6 339 aaKnown RBP6.46□□□□□ -1.38
TDP1-214ENST00000556063 Q8TCH9 128 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 NPRL2Q8WTW4 380 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 HPSE2Q8WWQ2 592 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 DVL3Q92997 716 aaPredicted RBP6.46□□□□□ -1.38
TDP1-214ENST00000556063 DERL3Q96Q80 235 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 OR14A2Q96R54 314 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 PIMREGQ9BSJ6 248 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 GCM1Q9NP62 436 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 NOX4Q9NPH5 578 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 TMEM106BQ9NUM4 274 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 UFSP2Q9NUQ7 469 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 C1orf123Q9NWV4 160 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 TAS2R4Q9NYW5 299 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 RNF7Q9UBF6 113 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 SCOCQ9UIL1 159 aa6.46□□□□□ -1.38
TDP1-214ENST00000556063 SSR3Q9UNL2 185 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms