RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CBLN4Q9NTU7 201 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 DECR2Q9NUI1 292 aa9.58□□□□□ -0.88
SHMT2-220ENST00000555634 RAI1Q7Z5J4 1906 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-220ENST00000555634 LRRK2Q5S007 2527 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 TRAV8-7A0A075B6U6 113 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 LRP5LA4QPB2 252 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 A6NHS1 94 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 A6NLC8 198 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 LRRC30A6NM36 301 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 CLDN1O95832 211 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 UBBP0CG47 229 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 IRF2P14316 349 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 SSTR2P30874 369 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 PPOXP50336 477 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 GPM6AP51674 278 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 TNFAIP6P98066 277 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-220ENST00000555634 SRSF1Q07955 248 aaKnown RBP eCLIP9.57□□□□□ -0.88
SHMT2-220ENST00000555634 RIN1Q13671 783 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 GPR176Q14439 515 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 ALKBH6Q3KRA9 238 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 AWAT2Q6E213 333 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 SFXN4Q6P4A7 337 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 CELF2-AS1Q8N7Q2 184 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 ZNF611Q8N823 705 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 ACBD4Q8NC06 268 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 OR11L1Q8NGX0 322 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 ACOT12Q8WYK0 555 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 OR5P3Q8WZ94 311 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 HPS1Q92902 700 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 SLC25A46Q96AG3 418 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 KCTD12Q96CX2 325 aaKnown RBP9.57□□□□□ -0.88
SHMT2-220ENST00000555634 TRMT61AQ96FX7 289 aaKnown RBP9.57□□□□□ -0.88
SHMT2-220ENST00000555634 SOX7Q9BT81 388 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 DCUN1D5Q9BTE7 237 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 CST11Q9H112 138 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 FN3KRPQ9HA64 309 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 ELL3Q9HB65 397 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-220ENST00000555634 MSL2Q9HCI7 577 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 DAPK2Q9UIK4 370 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 ADAM30Q9UKF2 790 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 CADP27708 2225 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 RTTNQ86VV8 2226 aa9.57□□□□□ -0.88
SHMT2-220ENST00000555634 hCG_1807616A0A1W2PRN6 198 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 ZNF732B4DXR9 585 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 AIPO00170 330 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 SIAH2O43255 324 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 SPRY3O43610 288 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 ZNF780AO75290 641 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-220ENST00000555634 TMEM225BP0DP42 221 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 ANOS1P23352 680 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 HTR2CP28335 458 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 S100A5P33763 92 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 ALDH3B1P43353 468 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 MAGEB1P43366 347 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 POU3F4P49335 361 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 BMXP51813 675 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 SCAND1P57086 179 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 SPCS2Q15005 226 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 RSU1Q15404 277 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 KISS1Q15726 138 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 IDNKQ5T6J7 187 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 SP5Q6BEB4 398 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-220ENST00000555634 ZNF529Q6P280 563 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 MKXQ8IYA7 352 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 Q8IYB0 196 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 TNFAIP8L1Q8WVP5 186 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 PHF21AQ96BD5 680 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 ITPKCQ96DU7 683 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 RAB1BQ9H0U4 201 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 CXorf56Q9H5V9 222 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 RNF167Q9H6Y7 350 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 SAP30LQ9HAJ7 183 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 GHRLQ9UBU3 117 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 STEAP1Q9UHE8 339 aa9.56□□□□□ -0.88
SHMT2-220ENST00000555634 MRPS28Q9Y2Q9 187 aaKnown RBP9.56□□□□□ -0.88
SHMT2-220ENST00000555634 AK6Q9Y3D8 172 aaKnown RBP9.56□□□□□ -0.88
SHMT2-220ENST00000555634 CHD3Q12873 2000 aaKnown RBP9.56□□□□□ -0.88
SHMT2-220ENST00000555634 TRIM64BA6NI03 449 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 IFITM5A6NNB3 132 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 C17orf100A8MU93 164 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 TRAPPC2LH3BP13 241 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 J3QT63 122 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 IFNL4K9M1U5 179 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 SLC17A2O00624 439 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 PIN1P1O15428 100 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 CTAG2O75638 210 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 KDM4BO94953 1096 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 BPNT1O95861 308 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 PLAUP00749 431 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 PLATP00750 562 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 CSTBP04080 98 aaKnown RBP9.55□□□□□ -0.88
SHMT2-220ENST00000555634 PRF1P14222 555 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 ZNF182P17025 639 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-220ENST00000555634 CD200P41217 278 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 HAAOP46952 286 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 MMP15P51511 669 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 TNK1Q13470 666 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 UBE2V2Q15819 145 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 KRT74Q7RTS7 529 aa9.55□□□□□ -0.88
SHMT2-220ENST00000555634 LRRTM1Q86UE6 522 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms