RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TRGV5A0A0B4J1U4 118 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 B4GALT3O60512 393 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 ACP1P24666 158 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 MTNR1BP49286 362 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 LSAMPQ13449 338 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 PDCD1Q15116 288 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 EAF1Q96JC9 268 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-216ENST00000555002 MIEN1Q9BRT3 115 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 K7ESM1 405 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 PPP6CO00743 305 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 KRASP01116 189 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 OR3A1P47881 315 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 TMEM81Q6P7N7 255 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 MFSD4AQ8N468 514 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 KCTD12Q96CX2 325 aaKnown RBP6.22□□□□□ -1.41
SYNE2-216ENST00000555002 GNPNAT1Q96EK6 184 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-216ENST00000555002 FOXC2Q99958 501 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 FAM53CQ9NYF3 392 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 UNCXA6NJT0 531 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 ATXN7O15265 892 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-216ENST00000555002 FAM87AP0C7U9 286 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 DAPP51397 102 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 HIST1H3AP68431 136 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 OR52I2Q8NH67 350 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 TMEM18Q96B42 140 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 RNF24Q9Y225 148 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 TO15178 435 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 FAHP16930 419 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 GALR1P47211 349 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 ERVFC1P60507 584 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 CST9Q5W186 159 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 ARRDC2Q8TBH0 407 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 GSX1Q9H4S2 264 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-216ENST00000555002 LYRM4Q9HD34 91 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 AGFG2O95081 481 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 PLAUP00749 431 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 PNLIPRP2P54317 469 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 TNXAQ16473 311 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 EDARADDQ8WWZ3 215 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-216ENST00000555002 H3BMH7 237 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 ADAM20O43506 726 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 CST7O76096 145 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF205O95201 554 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 SPINK2P20155 84 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 C20orf196Q8IYI0 205 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.22□□□□□ -1.41
SYNE2-216ENST00000555002 EGLN2Q96KS0 407 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 FAAP24Q9BTP7 215 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 SLC22A13Q9Y226 551 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 ROS1P08922 2347 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 SCG5P05408 212 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 KCNMB1Q16558 191 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 OR4C3Q8NH37 302 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 TMUB1Q9BVT8 246 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 IL36GQ9NZH8 169 aa6.22□□□□□ -1.41
SYNE2-216ENST00000555002 MED19A0JLT2 244 aaPredicted RBP6.21□□□□□ -1.41
SYNE2-216ENST00000555002 CD3EP07766 207 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 OR4A8P0C604 315 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 CEACAM6P40199 344 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 IHHQ14623 411 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 SSX1Q16384 188 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 SLC36A1Q7Z2H8 476 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 MUC15Q8N387 334 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 C5orf17Q8NAS9 161 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 SCN5AQ14524 2016 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 COL3A1P02461 1466 aaPredicted RBP6.21□□□□□ -1.41
SYNE2-216ENST00000555002 TDRD15B5MCY1 1934 aaKnown RBP6.21□□□□□ -1.41
SYNE2-216ENST00000555002 GFYI3L273 518 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 SLC2A10O95528 541 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 FGF2P09038 288 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 DHODHQ02127 395 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 DUSP5Q16690 384 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 SCARB1Q8WTV0 552 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 CLDN23Q96B33 292 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 TMEM56Q96MV1 263 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 SEC11CQ9BY50 192 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 MED29Q9NX70 200 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 BOLA1Q9Y3E2 137 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 DYSFO75923 2080 aa6.21□□□□□ -1.41
SYNE2-216ENST00000555002 IGKV3D-15A0A087WSY6 115 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 TRABD2BA6NFA1 517 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 HSBP1O75506 76 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 IGKV3-15P01624 115 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 RPL12P30050 165 aaKnown RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 SLC16A11Q8NCK7 471 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 RTN4IP1Q8WWV3 396 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 RASL11BQ9BPW5 248 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 ING1Q9UK53 422 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 DNAJC25-GNG10A0A024R161 153 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 OR1L1Q8NH94 360 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 BCL7CQ8WUZ0 217 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 CHODLQ9H9P2 273 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 MROH1Q8NDA8 1641 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 E5RGE8 158 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 DLX1P56177 255 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 PRSS36Q5K4E3 855 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 PTPMT1Q8WUK0 201 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-216ENST00000555002 PATE1Q8WXA2 126 aa6.21□□□□□ -1.42
SYNE2-216ENST00000555002 MS4A8Q9BY19 250 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms