RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 PLAC9Q5JTB6 97 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 GLIPR1L1Q6UWM5 242 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 Q6ZT83 130 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 BTN2A1Q7KYR7 527 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 CDH24Q86UP0 819 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 LIX1LQ8IVB5 337 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 GABRG1Q8N1C3 465 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 OR6K3Q8NGY3 331 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 ZNF107Q9UII5 783 aaPredicted RBP7.69□□□□□ -1.18
TDP1-210ENST00000554976 CACNA1GO43497 2377 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 CACNA1CQ13936 2221 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 TRAV18A0A075B6X5 111 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 A0A1W2PP11 408 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 NAP1L6A6NFF2 107 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 PTGFRP43088 359 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 TMEM50BP56557 158 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 TBR1Q16650 682 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 AWAT2Q6E213 333 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 VWA1Q6PCB0 445 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 CHMP1BQ7LBR1 199 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 MCEMP1Q8IX19 187 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 ZC4H2Q9NQZ6 224 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 GHRLQ9UBU3 117 aa7.69□□□□□ -1.18
TDP1-210ENST00000554976 EP300Q09472 2414 aaPredicted RBP7.69□□□□□ -1.18
TDP1-210ENST00000554976 LCATP04180 440 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 LPLP06858 475 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 UBBP0CG47 229 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 MPZP25189 248 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 GIFP27352 417 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 RAB1AP62820 205 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 RIPPLY1Q0D2K3 151 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 GK2Q14410 553 aaPredicted RBP7.68□□□□□ -1.18
TDP1-210ENST00000554976 COMMD2Q86X83 199 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.68□□□□□ -1.18
TDP1-210ENST00000554976 WDR31Q8NA23 367 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 Q8NFD4 153 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 OR4D10Q8NGI6 311 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 ZFAND1Q8TCF1 268 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 AKAP1Q92667 903 aaKnown RBP eCLIP7.68□□□□□ -1.18
TDP1-210ENST00000554976 SPSB1Q96BD6 273 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 IL36GQ9NZH8 169 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 MRPL15Q9P015 296 aaKnown RBP7.68□□□□□ -1.18
TDP1-210ENST00000554976 COPZ2Q9P299 210 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 MYEF2Q9P2K5 600 aaKnown RBP7.68□□□□□ -1.18
TDP1-210ENST00000554976 KNTC1P50748 2209 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 DNAJC13O75165 2243 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 A0A0A6YYJ9 748 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 FAM240BA0A1B0GVZ2 78 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 LINC00862A6NCI5 91 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 MFNGO00587 321 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 SCO1O75880 301 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 PRSS12P56730 875 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 RPS27AP62979 156 aaKnown RBP7.68□□□□□ -1.18
TDP1-210ENST00000554976 GSG1Q2KHT4 349 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 TMEM65Q6PI78 240 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 PLET1Q6UQ28 207 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 MDP1Q86V88 176 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 TMEM229BQ8NBD8 167 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 NAXEQ8NCW5 288 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 C1orf162Q8NEQ5 155 aaPredicted RBP7.68□□□□□ -1.18
TDP1-210ENST00000554976 OR5M9Q8NGP3 310 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 OR10R2Q8NGX6 335 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 PIGTQ969N2 578 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 CMBLQ96DG6 245 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 STARD4Q96DR4 205 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 DPAGT1Q9H3H5 408 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 GPR173Q9NS66 373 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 GVINP1Q7Z2Y8 2422 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 IGKV1-12A0A0C4DH73 117 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 RAD51DO75771 328 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 CST4P01036 141 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 IGKV1D-12P01611 117 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 CSF1P09603 554 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 CCL2P13500 99 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 IKZF1Q13422 519 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 DMRTC1Q5HYR2 192 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 FAAP20Q6NZ36 180 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 ZNF101Q8IZC7 436 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 ACBD4Q8NC06 268 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 MRGPRFQ96AM1 343 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 WBP1Q96G27 269 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 C20orf85Q9H1P6 137 aa7.68□□□□□ -1.18
TDP1-210ENST00000554976 PQLC2LA1A4F0 135 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 ZNF98A6NK75 572 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 NGFP01138 241 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 IGKV3-15P01624 115 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 SERPINA5P05154 406 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 HCKP08631 526 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 PRSS3P35030 304 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 SNTB2Q13425 540 aaKnown RBP7.67□□□□□ -1.18
TDP1-210ENST00000554976 LINC00303Q3SY05 128 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 RAB12Q6IQ22 244 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 GCNT2Q8N0V5 402 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 OR4C16Q8NGL9 310 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 KCNG3Q8TAE7 436 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 HPSE2Q8WWQ2 592 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 FAM46BQ96A09 425 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 APOBEC3DQ96AK3 386 aaPredicted RBP7.67□□□□□ -1.18
TDP1-210ENST00000554976 ABHD17AQ96GS6 310 aa7.67□□□□□ -1.18
TDP1-210ENST00000554976 MS4A3Q96HJ5 214 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms