RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 LIFP15018 202 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 KCNMB1Q16558 191 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 RSPO1Q2MKA7 263 aaPredicted RBP13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 CCDC157Q569K6 752 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 VAX1Q5SQQ9 334 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 CRIP3Q6Q6R5 217 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 ARRDC1Q8N5I2 433 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 FBXO17Q96EF6 278 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 SRXN1Q9BYN0 137 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 HS3ST3B1Q9Y662 390 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 GP1BAP07359 652 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 RPS18P62269 152 aaKnown RBP13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 ZNF273Q14593 569 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 AADACL3Q5VUY0 350 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 BRICD5Q6PL45 260 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 DRAM2Q6UX65 266 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 TMEM17Q86X19 198 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 BATF2Q8N1L9 274 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 NABP1Q96AH0 204 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 OCSTAMPQ9BR26 566 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 PROK2Q9HC23 129 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 A0A0G2JMM0 328 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 A0A1W2PPB8 328 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 A0A1W2PRS3 328 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 KIR3DP1A8MWS1 328 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 C9J4A7 227 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 LSM6P62312 80 aaKnown RBP13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 H3F3AP84243 136 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 PNLIPRP3Q17RR3 467 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 TFAP2EQ6VUC0 442 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 C20orf196Q8IYI0 205 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 PIK3IP1Q96FE7 263 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 PIGQQ9BRB3 760 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 NUDT16L1Q9BRJ7 211 aaKnown RBP13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 PLEKHJ1Q9NW61 149 aa13.74□□□□□ -0.21
ARHGEF40-203ENST00000554514 SERPINA5P05154 406 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 CD63P08962 238 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 FPR2P25090 351 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 MTCP1P56278 107 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 AIMP2Q13155 320 aaKnown RBP13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 RAB32Q13637 225 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 ACTBL2Q562R1 376 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 RPS19BP1Q86WX3 136 aaKnown RBP13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 LHFPL5Q8TAF8 219 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 NAT6Q93015 286 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 ALKBH3Q96Q83 286 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 MCTS1Q9ULC4 181 aaKnown RBP13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 NSG1A0A0A6YYJ2 146 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 FAM74A7A6NL05 159 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 ATP6V1G2-DDX39BF2Z307 99 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 ZNHIT1O43257 154 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 DSCR4P56555 118 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 FAM74A3Q4VXF1 159 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 ZNF774Q6NX45 483 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 EIF4E3Q8N5X7 224 aaKnown RBP13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 DYRK2Q92630 601 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 NECAB3Q96P71 396 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 NMES1Q9C002 83 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 TMEM231Q9H6L2 316 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 LDAHQ9H6V9 325 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 SLC39A1Q9NY26 324 aa13.73□□□□□ -0.21
ARHGEF40-203ENST00000554514 KLF7O75840 302 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 PDGFBP01127 241 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 PRF1P14222 555 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 THBS4P35443 961 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 RRADP55042 308 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 TAF9Q16594 264 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 ZNF585AQ6P3V2 769 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 MAML2Q8IZL2 1156 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 SSC4DQ8WTU2 575 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 TMEM54Q969K7 222 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 IMMP1LQ96LU5 166 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 NAA11Q9BSU3 229 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 PILRBQ9UKJ0 227 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 FGF5P12034 268 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 B4GALT1P15291 398 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 ACKR3P25106 362 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 OPRM1P35372 400 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 ZNF84P51523 738 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 TMEM123Q8N131 208 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 OR52H1Q8NGJ2 320 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 AKR7LQ8NHP1 331 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 ZNF2Q9BSG1 426 aaPredicted RBP13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 ADAT1Q9BUB4 502 aaKnown RBP13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 ANGPTL4Q9BY76 406 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 CHST5Q9GZS9 411 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 CRLF2Q9HC73 371 aa13.72□□□□□ -0.21
ARHGEF40-203ENST00000554514 FAM221AA4D161 298 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 DHRS7CA6NNS2 312 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 TRIM77I1YAP6 450 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 EIF1BO60739 113 aaKnown RBP13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 NR2C1P13056 603 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 TPT1P13693 172 aaKnown RBP13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 OTX2P32243 289 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 PDCD1Q15116 288 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 PMS2CLQ68D20 193 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 OR14L1PQ8NHC6 308 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 LILRB1Q8NHL6 650 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 SPTSSAQ969W0 71 aa13.71□□□□□ -0.21
ARHGEF40-203ENST00000554514 MARC2Q969Z3 335 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms