RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 RPUSD1Q9UJJ7 312 aaKnown RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 PURGQ9UJV8 347 aaKnown RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF229Q9UJW7 825 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 SLC7A7Q9UM01 511 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 SIGLEC7Q9Y286 467 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 NOSIPQ9Y314 301 aaKnown RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 MED31Q9Y3C7 131 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 SPIN1Q9Y657 262 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 V9GYH0 126 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 DYNC2H1Q8NCM8 4307 aaKnown RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 A0A087WZY1 265 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 GJE1A6NN92 205 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 M0R129 80 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 IMPA2O14732 288 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ARPC3O15145 178 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 TPPPO94811 219 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 KCNK2O95069 426 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 CDRT1O95170 752 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 IFNGP01579 166 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ITGA5P08648 1049 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 IGLL1P15814 213 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 SLC6A6P31641 620 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ACAA2P42765 397 aaKnown RBP4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ALDH3B1P43353 468 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ATP12AP54707 1039 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 PSG6Q00889 435 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 TGFBR3Q03167 851 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 HSF2Q03933 536 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ZNF155Q12901 538 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-226ENST00000554350 MRPL28Q13084 256 aaKnown RBP4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ZNF154Q13106 437 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 CBX3Q13185 183 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ODF1Q14990 250 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 HERPUD1Q15011 391 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 GPR68Q15743 365 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 MAPK14Q16539 360 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 TMEM176BQ3YBM2 270 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-226ENST00000554350 CCDC58Q4VC31 144 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 SLC35D3Q5M8T2 416 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 MRPL2Q5T653 305 aaKnown RBP4.71□□□□□ -1.66
ATXN3-226ENST00000554350 LIPKQ5VXJ0 399 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 SLC18B1Q6NT16 456 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 NIPAL3Q6P499 406 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ULK3Q6PHR2 472 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 SMARCD3Q6STE5 483 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ZNF322Q6U7Q0 402 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ZBTB46Q86UZ6 589 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 SYS1Q8N2H4 156 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 C17orf78Q8N4C9 275 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 IQCF1Q8N6M8 205 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 GATSQ8NAP1 163 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 POMGNT2Q8NAT1 580 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 DUSP18Q8NEJ0 188 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 DEFB108BQ8NET1 73 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 Q8NFD4 153 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 OR4N2Q8NGD1 307 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 TMEM255BQ8WV15 326 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 BPIFA2Q96DR5 249 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 TIMD4Q96H15 378 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 ARL5BQ96KC2 179 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 VSTM2LQ96N03 204 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 GPX7Q96SL4 187 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-226ENST00000554350 TINAGL1Q9GZM7 467 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-226ENST00000554350 Q9N2J8 555 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 EQTNQ9NQ60 294 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 TRIM36Q9NQ86 728 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 HINT3Q9NQE9 182 aaKnown RBP4.71□□□□□ -1.66
ATXN3-226ENST00000554350 EXOSC3Q9NQT5 275 aaKnown RBP4.71□□□□□ -1.66
ATXN3-226ENST00000554350 MMP26Q9NRE1 261 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 EMC3Q9P0I2 261 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 UPB1Q9UBR1 384 aa4.71□□□□□ -1.66
ATXN3-226ENST00000554350 A0A087WUJ7 227 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 TRAV1-2A0A0B4J238 106 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 TRAV40A0A0B4J280 105 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 A0A1W2PQL4 384 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-226ENST00000554350 FABP12A6NFH5 140 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 RIIAD1A6NNX1 92 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 PRR23D1E9PI22 279 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-226ENST00000554350 BOLA2-SMG1P6H3BVE0 249 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 CDC42EP2O14613 210 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 OGG1O15527 345 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 RGS5O15539 181 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 TPD52L2O43399 206 aaKnown RBP4.7□□□□□ -1.66
ATXN3-226ENST00000554350 SYNGR3O43761 229 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 FADS1O60427 444 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 GPR137BO60478 399 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 FOXH1O75593 365 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 SC5DO75845 299 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 GATBO75879 557 aaKnown RBP4.7□□□□□ -1.66
ATXN3-226ENST00000554350 NXPH3O95157 252 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 SERPINA3P01011 423 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 MT-ND5P03915 603 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 SBK2P0C263 348 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 OR2T7P0C7T2 308 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 PRR23D2P0DMB1 279 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-226ENST00000554350 IL7P13232 177 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 IFI30P13284 250 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 SLC2A5P22732 501 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 HTR2AP28223 471 aa4.7□□□□□ -1.66
ATXN3-226ENST00000554350 CALCRP30988 508 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms