RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 FOLR2P14207 255 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 IGFBP3P17936 291 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 PVALBP20472 110 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 MAOAP21397 527 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 RFC3P40938 356 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 DNASE1L1P49184 302 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 RAB13P51153 203 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 PPIAP62937 165 aaKnown RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 ERVK-25P63136 954 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 BLOC1S1P78537 153 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 DCDP81605 110 aaKnown RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 GLO1Q04760 184 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 FUT7Q11130 342 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 DHRS2Q13268 280 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 FAM53BQ14153 422 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 SLC17A1Q14916 467 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 PPA1Q15181 289 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 SURF2Q15527 256 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 INPP5JQ15735 1006 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 STK11Q15831 433 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 SGCBQ16585 318 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 EIF2S3LQ2VIR3 472 aaKnown RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 C2orf76Q3KRA6 126 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 LY6G6FQ5SQ64 297 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 ATPAF1Q5TC12 328 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 TMEM225Q6GV28 225 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 OR7E24Q6IFN5 339 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 ARMC6Q6NXE6 501 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 NHLRC1Q6VVB1 395 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 OR2W3Q7Z3T1 314 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 MISPQ8IVT2 679 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 SERPINA12Q8IW75 414 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 BAP18Q8IXM2 172 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 KDM8Q8N371 416 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 GTPBP8Q8N3Z3 284 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 BPIFB2Q8N4F0 458 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 RFLNBQ8N5W9 214 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 C10orf53Q8N6V4 93 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 CCDC54Q8NEL0 328 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 TMEM185AQ8NFB2 350 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 OR4K17Q8NGC6 315 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 OR6N2Q8NGY6 317 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 FAM46BQ96A09 425 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 SEH1LQ96EE3 360 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 BOD1Q96IK1 185 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 SLC41A2Q96JW4 573 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 C5orf34Q96MH7 638 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 MACROD1Q9BQ69 325 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 ZNF471Q9BX82 626 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 KRTAP4-5Q9BYR2 181 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 LAT2Q9GZY6 243 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 CHRNA10Q9GZZ6 450 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 TMEM185BQ9H7F4 350 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 RAB18Q9NP72 206 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 CPNE7Q9UBL6 633 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 KCNG2Q9UJ96 466 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 FBXO9Q9UK97 447 aaPredicted RBP5.21□□□□□ -1.58
VPS33B-203ENST00000554264 FBXL2Q9UKC9 423 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 ADAM18Q9Y3Q7 739 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 MMACHCQ9Y4U1 282 aa5.21□□□□□ -1.58
VPS33B-203ENST00000554264 ANKRD17O75179 2603 aaKnown RBP5.2□□□□□ -1.58
VPS33B-203ENST00000554264 TRAV14DV4A0A0A6YYC5 116 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 TMEM272A0A1B0GTI8 110 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 FRG2CA6NGY1 282 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 ZNF860A6NHJ4 632 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 ZNF98A6NK75 572 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 A8MUA0 341 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 PRSS44E7EML9 344 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 F5H0A9 414 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-203ENST00000554264 LDLRAD4O15165 306 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 SLC25A12O75746 678 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 RPP14O95059 124 aaKnown RBP5.2□□□□□ -1.58
VPS33B-203ENST00000554264 NSA2O95478 260 aaKnown RBP5.2□□□□□ -1.58
VPS33B-203ENST00000554264 PLGP00747 810 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-203ENST00000554264 IFNA6P05013 189 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 S100A9P06702 114 aaKnown RBP5.2□□□□□ -1.58
VPS33B-203ENST00000554264 FCER2P06734 321 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 ITGA5P08648 1049 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 EGR2P11161 476 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-203ENST00000554264 CD79AP11912 226 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 LYL1P12980 280 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 ICAM2P13598 275 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 PGCP20142 388 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 ZBTB25P24278 435 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 PSMB6P28072 239 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 HSD11B1P28845 292 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 PTGER1P34995 402 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 AQP2P41181 271 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 CDKN2AP42771 156 aaKnown RBP5.2□□□□□ -1.58
VPS33B-203ENST00000554264 PPICP45877 212 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 SOX2P48431 317 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 LUMP51884 338 aaPredicted RBP5.2□□□□□ -1.58
VPS33B-203ENST00000554264 CLDN12P56749 244 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 RAB5BP61020 215 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 RPL18Q07020 188 aaKnown RBP5.2□□□□□ -1.58
VPS33B-203ENST00000554264 PMPCAQ10713 525 aa5.2□□□□□ -1.58
VPS33B-203ENST00000554264 AIMP2Q13155 320 aaKnown RBP5.2□□□□□ -1.58
VPS33B-203ENST00000554264 SKP2Q13309 424 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms