RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ACOT2P49753 483 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 P2RX1P51575 399 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CAV2P51636 162 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 DIO3P55073 304 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 DLX6P56179 175 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 RAB38P57729 211 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 RAB25P57735 213 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TAS2R39P59534 338 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 DYNLL1P63167 89 aaKnown RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 CD164Q04900 197 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CYP24A1Q07973 514 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 MGAT3Q09327 533 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 LAMTOR4Q0VGL1 99 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 PON3Q15166 354 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 PSG5Q15238 335 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 RBMY1FQ15415 496 aaKnown RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 SHHQ15465 462 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 OR1Q1Q15612 314 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 PRSS8Q16651 343 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CEACAM21Q3KPI0 293 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 COA6Q5JTJ3 125 aaKnown RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 SYT6Q5T7P8 510 aaPredicted RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 OGFRL1Q5TC84 451 aaPredicted RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 FAM45BPQ6NSW5 357 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 DNAJC24Q6P3W2 148 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 UGT2A3Q6UWM9 527 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 DRAM2Q6UX65 266 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TEX43Q6ZNM6 134 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 ZNF493Q6ZR52 646 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 RNF165Q6ZSG1 346 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 FAM19A1Q7Z5A9 133 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 MTERF4Q7Z6M4 381 aaKnown RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 PRSS58Q8IYP2 241 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 ENTHD1Q8IYW4 607 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 DAW1Q8N136 415 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TMEM156Q8N614 296 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 COX18Q8N8Q8 333 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 UBAC2Q8NBM4 344 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CSNK1G2-AS1Q8NCQ2 148 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 C19orf18Q8NEA5 215 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TTLQ8NG68 377 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 OR5D18Q8NGL1 313 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 OR10Z1Q8NGY1 313 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 OR10J6PQ8NGY7 276 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 OR13G1Q8NGZ3 307 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 ACTL9Q8TC94 416 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 FAM45AQ8TCE6 357 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 RNF133Q8WVZ7 376 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 NELFBQ8WX92 580 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 UCN3Q969E3 161 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 NTAN1Q96AB6 310 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 S100PBPQ96BU1 408 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 VSIG2Q96IQ7 327 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 BTN2A3PQ96KV6 586 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 PGLYRP3Q96LB9 341 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 MAGEB18Q96M61 343 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 SMIM14Q96QK8 99 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 NICN1Q9BSH3 213 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TAPBPLQ9BX59 468 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 SLC25A2Q9BXI2 301 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 UGT2B28Q9BY64 529 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 YTHDF1Q9BYJ9 559 aaKnown RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 DEFB127Q9H1M4 99 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 SPNS1Q9H2V7 528 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 OR51B5Q9H339 312 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 DHX35Q9H5Z1 703 aaKnown RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 METTL17Q9H7H0 456 aaPredicted RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 ZDHHC11Q9H8X9 412 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 ZDHHC4Q9NPG8 344 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 MED4Q9NPJ6 270 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 RRAGDQ9NQL2 400 aaPredicted RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 CCL28Q9NRJ3 127 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TNFRSF19Q9NS68 423 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 FAM49BQ9NUQ9 324 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 MARCH5Q9NX47 278 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TAS2R9Q9NYW1 312 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 ANXA10Q9UJ72 324 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CLEC4EQ9ULY5 219 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 USH1CQ9Y6N9 552 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 PCDH11XQ9BZA7 1347 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 RALGAPA1Q6GYQ0 2036 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 TRAV8-6A0A0B4J262 113 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 A0A1W2PRG6 482 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 DAPL1A0PJW8 107 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 EFCAB9A8MZ26 197 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 CENPBD1B2RD01 187 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 F5H768 121 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 J3QT63 122 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 M0R036 132 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 MYL12BO14950 172 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 FGF16O43320 207 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 CTNSO60931 367 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 GABARAPO95166 117 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 VAMP5O95183 116 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 SLC25A27O95847 323 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 TYMSP04818 313 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 PCCAP05165 728 aaPredicted RBP1.64□□□□□ -2.15
SRP54-204ENST00000553923 SERPINA6P08185 405 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 CD3GP09693 182 aa1.64□□□□□ -2.15
SRP54-204ENST00000553923 CHTF8P0CG12 524 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms