RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 WNT11O96014 354 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 F12P00748 615 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-209ENST00000553659 ADRA2CP18825 462 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 AP3S2P59780 193 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 HIST1H3AP68431 136 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 ECH1Q13011 328 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 GABRA6Q16445 453 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 SGCAQ16586 387 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 ODF4Q2M2E3 257 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 HIST2H3PS2Q5TEC6 136 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 FAM27BQ5VT28 67 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 ZNF57Q68EA5 555 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-209ENST00000553659 CYB5R2Q6BCY4 276 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 CORO6Q6QEF8 472 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 CFAP77Q6ZQR2 320 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 HIST2H3AQ71DI3 136 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 SYT9Q86SS6 491 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 SERPINA12Q8IW75 414 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 CADM3Q8N126 398 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 DUSP18Q8NEJ0 188 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 OR51A4Q8NGJ6 313 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 OR10S1Q8NGN2 331 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 OR10AC1Q8NH08 325 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 DEDD2Q8WXF8 326 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 C11orf54Q9H0W9 315 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-209ENST00000553659 ZNF275Q9NSD4 429 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-209ENST00000553659 LPAR3Q9UBY5 353 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 OR5V1Q9UGF6 321 aa13.78□□□□□ -0.2
ACTN1-209ENST00000553659 PLA2G10O15496 165 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 ECDO95905 644 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-209ENST00000553659 ITGA5P08648 1049 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 CST2P09228 141 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 ACSM4P0C7M7 580 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 TRAPPC2P0DI81 140 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 TRAPPC2BP0DI82 140 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 CDAP32320 146 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 RFX2P48378 723 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 SELENOPP49908 381 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 EFNA4P52798 201 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 PCBD1P61457 104 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 SCRN3Q0VDG4 424 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 OTPQ5XKR4 325 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 PLET1Q6UQ28 207 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 DOK3Q7L591 496 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 CDH26Q8IXH8 852 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 CMTM4Q8IZR5 234 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 WDR31Q8NA23 367 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 SYNPRQ8TBG9 265 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 C10orf105Q8TEF2 133 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 SMIM4Q8WVI0 70 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 TRIM63Q969Q1 353 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 SPTSSAQ969W0 71 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 NABP1Q96AH0 204 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 ZNF416Q9BWM5 594 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 C1QTNF6Q9BXI9 259 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 LINC00470Q9BZP3 86 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 PLEKHA1Q9HB21 404 aa13.77□□□□□ -0.21
ACTN1-209ENST00000553659 PNRC2Q9NPJ4 139 aaKnown RBP13.77□□□□□ -0.21
ACTN1-209ENST00000553659 A0A0A6YYH2 397 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 LOC100289279A0A1B0GTE1 492 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 FAM240BA0A1B0GVZ2 78 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 A6NJ64 397 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 TTRP02766 147 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 GSTT2BP0CG30 244 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 SPNP16150 400 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 CCL1P22362 96 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 USF1P22415 310 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-209ENST00000553659 APOBEC3AP31941 199 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-209ENST00000553659 MAGEB1P43366 347 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 CX3CR1P49238 355 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 FOXG1P55316 489 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-209ENST00000553659 DYRK1AQ13627 763 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 ELFN2Q5R3F8 820 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 C1QTNF12Q5T7M4 302 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 PGAP1Q75T13 922 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 ZNF283Q8N7M2 679 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 DRAXINQ8NBI3 349 aaPredicted RBP13.76□□□□□ -0.21
ACTN1-209ENST00000553659 OR5D14Q8NGL3 314 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 PTX4Q96A99 478 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 C10orf35Q96D05 121 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 NEURL2Q9BR09 285 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 SHARPINQ9H0F6 387 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 DIABLOQ9NR28 239 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 TAS2R4Q9NYW5 299 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 COPZ2Q9P299 210 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 ATP23Q9Y6H3 246 aa13.76□□□□□ -0.21
ACTN1-209ENST00000553659 LOC390937A0A1W2PQ73 354 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 NAP1L6A6NFF2 107 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 GABARAPH6UMI1 98 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 P2RY10O00398 339 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 LMX1BO60663 402 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 SCGNO76038 276 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 IGHV4-31P0DP07 118 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 ZNF20P17024 532 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 HTR2CP28335 458 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 BDKRB2P30411 391 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 ENDOGQ14249 297 aaKnown RBP13.75□□□□□ -0.21
ACTN1-209ENST00000553659 TMEM69Q5SWH9 247 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 FAM166AQ6J272 317 aa13.75□□□□□ -0.21
ACTN1-209ENST00000553659 C17orf78Q8N4C9 275 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms