RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ZNF841Q6ZN19 808 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 Q6ZSR3 168 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 MOB3CQ70IA8 216 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 SLC36A1Q7Z2H8 476 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 CATSPERDQ86XM0 798 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 ENTHD1Q8IYW4 607 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 ACBD7Q8N6N7 88 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 SCCPDHQ8NBX0 429 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 C19orf18Q8NEA5 215 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 OR14K1Q8NGZ2 314 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 SPATA3Q8NHX4 192 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 ZNF418Q8TF45 676 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-204ENST00000553324 RORBQ92753 470 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 SMPD3Q9NY59 655 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-204ENST00000553324 GNG8Q9UK08 70 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 SLC22A13Q9Y226 551 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 EXOGQ9Y2C4 368 aaKnown RBP12.79□□□□□ -0.36
SHMT2-204ENST00000553324 ATRQ13535 2644 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 MXRA5Q9NR99 2828 aa12.79□□□□□ -0.36
SHMT2-204ENST00000553324 FBN1P35555 2871 aaKnown RBP12.78□□□□□ -0.36
SHMT2-204ENST00000553324 IGHV2-70DA0A0C4DH43 119 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 A0A1B0GTI1 187 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 A0A1B0GVI7 797 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 GPR37O15354 613 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 TMPRSS2O15393 492 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 SYT7O43581 403 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 FADS2O95864 444 aaKnown RBP12.78□□□□□ -0.36
SHMT2-204ENST00000553324 ECDO95905 644 aaPredicted RBP12.78□□□□□ -0.36
SHMT2-204ENST00000553324 GYPAP02724 150 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 FAHP16930 419 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 GABRB1P18505 474 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 ADRA2CP18825 462 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 EPHA1P21709 976 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 CCL1P22362 96 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 ACTA2P62736 377 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 ACTG2P63267 376 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 CSNK2BP67870 215 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 PAX2Q02962 417 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 ZNF85Q03923 595 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 ARMCX4Q5H9R4 360 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 CEP78Q5JTW2 689 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 PLCXD3Q63HM9 321 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 USP43Q70EL4 1123 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 FAM90A1Q86YD7 464 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 ZNF573Q86YE8 665 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 PACRGLQ8N7B6 248 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 HPSE2Q8WWQ2 592 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 RPL3LQ92901 407 aaKnown RBP12.78□□□□□ -0.36
SHMT2-204ENST00000553324 C10orf35Q96D05 121 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 TECTBQ96PL2 329 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 DNTTIP1Q9H147 329 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 OR51I2Q9H344 312 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 INPP5EQ9NRR6 644 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 DNAJB11Q9UBS4 358 aa12.78□□□□□ -0.36
SHMT2-204ENST00000553324 RPL36Q9Y3U8 105 aaKnown RBP12.78□□□□□ -0.36
SHMT2-204ENST00000553324 P2RY10O00398 339 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 ENSAO43768 121 aaKnown RBP12.77□□□□□ -0.37
SHMT2-204ENST00000553324 SERPINA3P01011 423 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 RPSAP08865 295 aaKnown RBP12.77□□□□□ -0.37
SHMT2-204ENST00000553324 UBCP0CG48 685 aaKnown RBP12.77□□□□□ -0.37
SHMT2-204ENST00000553324 ISL1P61371 349 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 RAB40BQ12829 278 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 CDONQ4KMG0 1287 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 KLHL22Q53GT1 634 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 ATPAF1Q5TC12 328 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-204ENST00000553324 TMEM244Q5VVB8 128 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 TTC23Q5W5X9 447 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 LPCAT4Q643R3 524 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 TMEM42Q69YG0 159 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 PNLDC1Q8NA58 520 aaKnown RBP12.77□□□□□ -0.37
SHMT2-204ENST00000553324 JMJD8Q96S16 334 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 NUDT16L1Q9BRJ7 211 aaKnown RBP12.77□□□□□ -0.37
SHMT2-204ENST00000553324 RASL12Q9NYN1 266 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 NUP50Q9UKX7 468 aa12.77□□□□□ -0.37
SHMT2-204ENST00000553324 DBTP11182 482 aaKnown RBP12.76□□□□□ -0.37
SHMT2-204ENST00000553324 EGR1P18146 543 aa12.76□□□□□ -0.37
SHMT2-204ENST00000553324 MRPL28Q13084 256 aaKnown RBP12.76□□□□□ -0.37
SHMT2-204ENST00000553324 GALEQ14376 348 aa12.76□□□□□ -0.37
SHMT2-204ENST00000553324 FDX2Q6P4F2 183 aa12.76□□□□□ -0.37
SHMT2-204ENST00000553324 BPIFB2Q8N4F0 458 aa12.76□□□□□ -0.37
SHMT2-204ENST00000553324 HAVCR2Q8TDQ0 301 aa12.76□□□□□ -0.37
SHMT2-204ENST00000553324 DACT3Q96B18 629 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-204ENST00000553324 LGALS12Q96DT0 336 aa12.76□□□□□ -0.37
SHMT2-204ENST00000553324 MED30Q96HR3 178 aa12.76□□□□□ -0.37
SHMT2-204ENST00000553324 DMRTB1Q96MA1 342 aa12.76□□□□□ -0.37
SHMT2-204ENST00000553324 SUCNR1Q9BXA5 334 aa12.76□□□□□ -0.37
SHMT2-204ENST00000553324 PLEKHA1Q9HB21 404 aa12.76□□□□□ -0.37
SHMT2-204ENST00000553324 MRPS18AQ9NVS2 196 aaKnown RBP12.76□□□□□ -0.37
SHMT2-204ENST00000553324 SLC7A11Q9UPY5 501 aa12.76□□□□□ -0.37
SHMT2-204ENST00000553324 IGHV3OR15-7A0A075B7D8 119 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 DVL1O14640 695 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 AKR7A2O43488 359 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 GATBO75879 557 aaKnown RBP12.75□□□□□ -0.37
SHMT2-204ENST00000553324 FSHBP01225 129 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 ISG15P05161 165 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 GLRA1P23415 457 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 CCR9P51686 369 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 HOXA4Q00056 320 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-204ENST00000553324 ZNF91Q05481 1191 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 RCN1Q15293 331 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms