RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 KDM8Q8N371 416 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 CHST4Q8NCG5 386 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 AGBL5Q8NDL9 886 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 OR10R2Q8NGX6 335 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 KTI12Q96EK9 354 aaPredicted RBP6.52□□□□□ -1.37
BEST3-212ENST00000553096 OR5B2Q96R09 309 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 RNF126Q9BV68 326 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 LAT2Q9GZY6 243 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 CHRNA10Q9GZZ6 450 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 OPA3Q9H6K4 179 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 SERINC1Q9NRX5 453 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 WNT16Q9UBV4 365 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 LRP12Q9Y561 859 aa6.52□□□□□ -1.37
BEST3-212ENST00000553096 PUS1Q9Y606 427 aaKnown RBP eCLIP6.52□□□□□ -1.37
BEST3-212ENST00000553096 IGLV1-36A0A0B4J1U3 117 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 LOC107986453A0A1B0GWG9 222 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 COLCA2A8K830 154 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 C17orf105B2RV13 164 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 TMEM150CB9EJG8 249 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 H0YIG0 161 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 RAB27BO00194 218 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 FBXO24O75426 580 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 FARS2O95363 451 aaKnown RBP6.51□□□□□ -1.37
BEST3-212ENST00000553096 SFT2D2O95562 160 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 IGHMP01871 453 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 CHRM2P08172 466 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 SFTA3P0C7M3 94 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 LINC00614P0C842 121 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 FOLR1P15328 257 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 ABCD3P28288 659 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 ADH6P28332 368 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 HRH1P35367 487 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 PMELP40967 661 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 RPS27P42677 84 aaKnown RBP6.51□□□□□ -1.37
BEST3-212ENST00000553096 MFGE8Q08431 387 aaPredicted RBP6.51□□□□□ -1.37
BEST3-212ENST00000553096 SPOCK1Q08629 439 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 TOMM34Q15785 309 aaPredicted RBP6.51□□□□□ -1.37
BEST3-212ENST00000553096 MOGAT2Q3SYC2 334 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 DNM1P34Q6PK57 102 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 TTLL10Q6ZVT0 673 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 SLC22A24Q8N4F4 322 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 COMMD1Q8N668 190 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 ZSCAN4Q8NAM6 433 aaPredicted RBP6.51□□□□□ -1.37
BEST3-212ENST00000553096 GATSQ8NAP1 163 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 ZNF519Q8TB69 540 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 TAAR8Q969N4 342 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 ABHD6Q9BV23 337 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 TUBA4BQ9H853 241 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 ACKR4Q9NPB9 350 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 PARP11Q9NR21 331 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 CUTCQ9NTM9 273 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 EML6Q6ZMW3 1958 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 COL27A1Q8IZC6 1860 aaPredicted RBP6.51□□□□□ -1.37
BEST3-212ENST00000553096 LOC100509620A0A075B734 347 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 C5orf52A6NGY3 159 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 CEACAM18A8MTB9 384 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 SLC16A7O60669 478 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 DDAH2O95865 285 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 MT-ND4LP03901 98 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 DVL1P1P54792 670 aaPredicted RBP6.51□□□□□ -1.37
BEST3-212ENST00000553096 F2RL1P55085 397 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 SRSF3P84103 164 aaKnown RBP6.51□□□□□ -1.37
BEST3-212ENST00000553096 USF2Q15853 346 aaPredicted RBP6.51□□□□□ -1.37
BEST3-212ENST00000553096 VAX1Q5SQQ9 334 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 CBLN3Q6UW01 205 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 MED25Q71SY5 747 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 LYPD6Q86Y78 171 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 TMEM105Q8N8V8 129 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 TERB2Q8NHR7 220 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 ZNF721Q8TF20 911 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 MRGPRFQ96AM1 343 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 MRGPRX4Q96LA9 322 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 MESP1Q9BRJ9 268 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 PCED1AQ9H1Q7 454 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 TXNIPQ9H3M7 391 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 HRH4Q9H3N8 390 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 GAL3ST2Q9H3Q3 398 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 ZMAT3Q9HA38 289 aaKnown RBP6.51□□□□□ -1.37
BEST3-212ENST00000553096 METTL1Q9UBP6 276 aaKnown RBP6.51□□□□□ -1.37
BEST3-212ENST00000553096 OR52A1Q9UKL2 312 aa6.51□□□□□ -1.37
BEST3-212ENST00000553096 MUC6Q6W4X9 2439 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 DLEU1O43261 78 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 SOX15O60248 233 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 SRSF10O75494 262 aaKnown RBP6.5□□□□□ -1.37
BEST3-212ENST00000553096 UTS2O95399 124 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 CSTBP04080 98 aaKnown RBP6.5□□□□□ -1.37
BEST3-212ENST00000553096 IGKV3-11P04433 115 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 CD5P06127 495 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 ZNF823P16415 610 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 FPR2P25090 351 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 CDKN1BP46527 198 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 SULT1A2P50226 295 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 DMRTA1Q5VZB9 504 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 ADAD2Q8NCV1 583 aaKnown RBP6.5□□□□□ -1.37
BEST3-212ENST00000553096 OR10A7Q8NGE5 316 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 OR4K15Q8NH41 348 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 RNASE8Q8TDE3 154 aaKnown RBP6.5□□□□□ -1.37
BEST3-212ENST00000553096 DNASE2BQ8WZ79 361 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 NKD1Q969G9 470 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 ADIPOR1Q96A54 375 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms