RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 NKAIN3Q8N8D7 197 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 OR1M1Q8NGA1 313 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 OR56B2PQ8NGI1 322 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 OR13C2Q8NGS9 318 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 BPIFA2Q96DR5 249 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 SPDL1Q96EA4 605 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 LYZL4Q96KX0 146 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 GAFA1Q96PS6 74 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 ZNF649Q9BS31 505 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 MCRIP2Q9BUT9 160 aaKnown RBP4.29□□□□□ -1.72
HOXB3-213ENST00000552000 NUAK2Q9H093 628 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 WDR13Q9H1Z4 485 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 RNPEPL1Q9HAU8 725 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 MRPL15Q9P015 296 aaKnown RBP4.29□□□□□ -1.72
HOXB3-213ENST00000552000 PITPNC1Q9UKF7 332 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 GMEB1Q9Y692 573 aa4.29□□□□□ -1.72
HOXB3-213ENST00000552000 EFCAB9A8MZ26 197 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 M0R135 149 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 DCTN6O00399 190 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 BHLHE40O14503 412 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 CDIPTO14735 213 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 SIGLEC5O15389 551 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 AHCYL1O43865 530 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 GLCEO94923 617 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 PLA2G1BP04054 148 aaKnown RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 OSMP13725 252 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 MDH1P40925 334 aaKnown RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 NAA10P41227 235 aaPredicted RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 GABRA2P47869 451 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 OR1E2P47887 323 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 CRYBA2P53672 197 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 TPTEP56180 551 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 CAV3P56539 151 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 SSX2Q16385 188 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 SNAI3Q3KNW1 292 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 GLYATL3Q5SZD4 288 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 KCTD18Q6PI47 426 aaPredicted RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 DLEU7Q6UYE1 221 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 ZNF782Q6ZMW2 699 aaPredicted RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 CFAP77Q6ZQR2 320 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 ZNF788Q6ZQV5 615 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 C18orf65Q6ZTR6 163 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 PTCHD4Q6ZW05 846 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 FAM122BQ7Z309 247 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 TMEM185AQ8NFB2 350 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 OR51D1Q8NGF3 324 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 OR4X2Q8NGF9 303 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 OR8S1Q8NH09 359 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 ANGPTL6Q8NI99 470 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 C12orf43Q96C57 262 aaKnown RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 ZNF799Q96GE5 643 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 MED30Q96HR3 178 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 RSRC1Q96IZ7 334 aaKnown RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 TSSK2Q96PF2 358 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 RAB3IPQ96QF0 476 aaPredicted RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 ATF6BQ99941 703 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 TMEM120AQ9BXJ8 343 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 ROPN1BQ9BZX4 212 aaPredicted RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 DNTTIP1Q9H147 329 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 ZMAT4Q9H898 229 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 HEXA-AS1Q9H8Q6 139 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 ROPN1Q9HAT0 212 aaPredicted RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 KCNK9Q9NPC2 374 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 THAP1Q9NVV9 213 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 GFOD1Q9NXC2 390 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 HAO2Q9NYQ3 351 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 CCDC167Q9P0B6 97 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 NKX1-2Q9UD57 310 aaPredicted RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 ZMAT5Q9UDW3 170 aaKnown RBP4.28□□□□□ -1.72
HOXB3-213ENST00000552000 N6AMT1Q9Y5N5 214 aa4.28□□□□□ -1.72
HOXB3-213ENST00000552000 KIAA1109Q2LD37 5005 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 HTR3EA5X5Y0 456 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 FAM90A8PA6NJQ4 464 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 ANKRD30BLA7E2S9 258 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 SOCS2O14508 198 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 CDC42EP2O14613 210 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 AKR7A2O43488 359 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 RAMP3O60896 148 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 SNNO75324 88 aaPredicted RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 RHBDL1O75783 438 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 ACAA1P09110 424 aaPredicted RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 SLC2A1P11166 492 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 CHATP28329 748 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 CDKN2AP42771 156 aaKnown RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 GPR4P46093 362 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 YAP1P46937 504 aaKnown RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 CEBPDP49716 269 aaPredicted RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 THBS3P49746 956 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 LUMP51884 338 aaPredicted RBP4.27□□□□□ -1.73
HOXB3-213ENST00000552000 CAPZA1P52907 286 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 SLC18A1P54219 525 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 MXRA7P84157 204 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 PRKCDQ05655 676 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 RFX4Q33E94 735 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 KRT71Q3SY84 523 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 ANKDD1AQ495B1 522 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 ZBED5Q49AG3 693 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 AGKQ53H12 422 aa4.27□□□□□ -1.73
HOXB3-213ENST00000552000 LDLRAD2Q5SZI1 272 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms