RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 KCTD18Q6PI47 426 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-222ENST00000551425 TBPL2Q6SJ96 375 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 SLC16A9Q7RTY1 509 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 C16orf82Q7Z2V1 217 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 ZBTB46Q86UZ6 589 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 TSPEARQ8WU66 669 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 SDSLQ96GA7 329 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 CITED4Q96RK1 184 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 PPP1R3EQ9H7J1 279 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 TMEM5Q9Y2B1 443 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 STARD9Q9P2P6 4700 aa9.5□□□□□ -0.89
PTCH1-222ENST00000551425 HUWE1Q7Z6Z7 4374 aaKnown RBP9.49□□□□□ -0.89
PTCH1-222ENST00000551425 TMEM210A6NLX4 147 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 LPLP06858 475 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 PSG2P11465 335 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 YAP1P46937 504 aaKnown RBP9.49□□□□□ -0.89
PTCH1-222ENST00000551425 CEBPDP49716 269 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-222ENST00000551425 SLC7A2P52569 658 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 FXYD6P3P58550 94 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 RPL23AP62750 156 aaKnown RBP9.49□□□□□ -0.89
PTCH1-222ENST00000551425 KLF10Q13118 480 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 MAPRE2Q15555 327 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 FAM76BQ5HYJ3 339 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 ZNF782Q6ZMW2 699 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-222ENST00000551425 CALHM1Q8IU99 346 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 SBSPONQ8IVN8 264 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 OSR2Q8N2R0 312 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 OR11H6Q8NGC7 330 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 OR4C15Q8NGM1 316 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 RPL3LQ92901 407 aaKnown RBP9.49□□□□□ -0.89
PTCH1-222ENST00000551425 AKR1E2Q96JD6 320 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 MICU1Q9BPX6 476 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 RTL8AQ9BWD3 113 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 MYLK2Q9H1R3 596 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 MRPL22Q9NWU5 206 aaKnown RBP9.49□□□□□ -0.89
PTCH1-222ENST00000551425 RHBDD3Q9Y3P4 386 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 SNX13Q9Y5W8 968 aa9.49□□□□□ -0.89
PTCH1-222ENST00000551425 ANXA2P2A6NMY6 339 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 C17orf98A8MV24 154 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 J3KTA2 159 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 ANGPT2O15123 496 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 RENP00797 406 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 HLA-DQA2P01906 255 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 SLC2A1P11166 492 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 CCL3L1P16619 93 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 JUNBP17275 347 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-222ENST00000551425 DCTDP32321 178 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 ENTPD1P49961 510 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 OR12D2P58182 307 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 SELENOWP63302 87 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 CBX1P83916 185 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 ZNF770Q6IQ21 691 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-222ENST00000551425 ADAMTSL5Q6ZMM2 481 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 RRM2BQ7LG56 351 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 OR2W3Q7Z3T1 314 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 OR13D1Q8NGV5 346 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 FAM46AQ96IP4 442 aaKnown RBP9.48□□□□□ -0.89
PTCH1-222ENST00000551425 TPD52L3Q96J77 140 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 LYZL4Q96KX0 146 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 NMNAT3Q96T66 252 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 PAPOLGQ9BWT3 736 aaKnown RBP9.48□□□□□ -0.89
PTCH1-222ENST00000551425 LIN7BQ9HAP6 207 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 VNN3Q9NY84 501 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 HERC2O95714 4834 aa9.48□□□□□ -0.89
PTCH1-222ENST00000551425 hCG_38984A0A1B0GV85 526 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 PGA5P0DJD9 388 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 GLRA1P23415 457 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 KDELR2P33947 212 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 PRKXP51817 358 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 LUMP51884 338 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-222ENST00000551425 CAPZA1P52907 286 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 DLX6P56179 175 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 CYLC2Q14093 348 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-222ENST00000551425 ZNF273Q14593 569 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 SNCBQ16143 134 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 ABCA11PQ4W5N1 156 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 LRRC23Q53EV4 343 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-222ENST00000551425 MINOS1Q5TGZ0 78 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 NANOGP8Q6NSW7 305 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 ERICH5Q6P6B1 374 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 ZDHHC21Q8IVQ6 265 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 CSNK2A3Q8NEV1 391 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 RP9Q8TA86 221 aaKnown RBP9.47□□□□□ -0.89
PTCH1-222ENST00000551425 OR5P3Q8WZ94 311 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 SGK3Q96BR1 496 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 CMTM5Q96DZ9 223 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 RSRC1Q96IZ7 334 aaKnown RBP9.47□□□□□ -0.89
PTCH1-222ENST00000551425 ERMAPQ96PL5 475 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-222ENST00000551425 KCNJ15Q99712 375 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 COPS4Q9BT78 406 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 ANKRD19PQ9H560 264 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 RPRD1BQ9NQG5 326 aaKnown RBP9.47□□□□□ -0.89
PTCH1-222ENST00000551425 ZFP57Q9NU63 452 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 HILPDAQ9Y5L2 63 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 N6AMT1Q9Y5N5 214 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 MPC1Q9Y5U8 109 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 SMAD5-AS1Q9Y6J3 95 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 MINOS1-NBL1R4GNA1 71 aa9.47□□□□□ -0.89
PTCH1-222ENST00000551425 BBIP1A8MTZ0 92 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms