RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 RAB6AP20340 208 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 RAB35Q15286 201 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 GRK1Q15835 563 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 SEZ6L2Q6UXD5 910 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 C5orf24Q7Z6I8 188 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 OR8H3Q8N146 312 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 SEMA6DQ8NFY4 1073 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 CPT1CQ8TCG5 803 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 MARCH1Q8TCQ1 289 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 CHST5Q9GZS9 411 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 SLCO5A1Q9H2Y9 848 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 RANBP3Q9H6Z4 567 aaPredicted RBP9.65□□□□□ -0.87
CUX1-212ENST00000547394 ZNF701Q9NV72 531 aaPredicted RBP9.65□□□□□ -0.87
CUX1-212ENST00000547394 ABI3Q9P2A4 366 aa9.65□□□□□ -0.87
CUX1-212ENST00000547394 IGKV1D-8A0A087WSZ0 117 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 C5orf49A4QMS7 147 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 OR14I1A6ND48 311 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
CUX1-212ENST00000547394 HLA-AP01891 365 aaKnown RBP9.64□□□□□ -0.87
CUX1-212ENST00000547394 EDN3P14138 238 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 HIST1H1DP16402 221 aaKnown RBP9.64□□□□□ -0.87
CUX1-212ENST00000547394 CXCL2P19875 107 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 RBMXP38159 391 aaKnown RBP9.64□□□□□ -0.87
CUX1-212ENST00000547394 ZNF133P52736 654 aaPredicted RBP9.64□□□□□ -0.87
CUX1-212ENST00000547394 RRADP55042 308 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 ECH1Q13011 328 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 HIKESHIQ53FT3 197 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 KCTD9Q7L273 389 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 OR2AK2Q8NG84 335 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 OR4K15Q8NH41 348 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 KCNG3Q8TAE7 436 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 FBXW5Q969U6 566 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 S100A13Q99584 98 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 B3GNT2Q9NY97 397 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 BSNQ9UPA5 3926 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 ICE1Q9Y2F5 2266 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 SLC22A5O76082 557 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 NGFP01138 241 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 IGLV3-1P01715 115 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 ZNF708P17019 499 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 CTSSP25774 331 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 SORDQ00796 357 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 DHRS2Q13268 280 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 EIF3IQ13347 325 aaKnown RBP9.64□□□□□ -0.87
CUX1-212ENST00000547394 PPP1R1AQ13522 171 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 PIGYQ3MUY2 71 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 PNLDC1Q8NA58 520 aaKnown RBP9.64□□□□□ -0.87
CUX1-212ENST00000547394 ST8SIA4Q92187 359 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 HEXA-AS1Q9H8Q6 139 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 SPRR3Q9UBC9 169 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 PCDHGA1Q9Y5H4 931 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 TIMM10BQ9Y5J6 103 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 V9GYS6 101 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 ZZEF1O43149 2961 aa9.64□□□□□ -0.87
CUX1-212ENST00000547394 A0A0U1RQV5 110 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 KALRNO60229 2985 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 SYNGR4O95473 234 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 HPNP05981 417 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 CST2P09228 141 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 OPRM1P35372 400 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 SCRN3Q0VDG4 424 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 TSC22D1Q15714 1073 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 RAB12Q6IQ22 244 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 FDCSPQ8NFU4 85 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 GON7Q9BXV9 100 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 TMPRSS13Q9BYE2 586 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 SCPEP1Q9HB40 452 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 PLEKHA6Q9Y2H5 1048 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 NOP16Q9Y3C1 178 aaKnown RBP9.63□□□□□ -0.87
CUX1-212ENST00000547394 SHANK1Q9Y566 2161 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 MED12LQ86YW9 2145 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 OR6C6A6NF89 314 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 TPD52L2O43399 206 aaKnown RBP9.63□□□□□ -0.87
CUX1-212ENST00000547394 IFNA6P05013 189 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 GSK3AP49840 483 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 PER3P56645 1201 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 BEX5Q5H9J7 111 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 SPATA46Q5T0L3 261 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 RFPL4BQ6ZWI9 263 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 SSC4DQ8WTU2 575 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 INTS12Q96CB8 462 aaKnown RBP9.63□□□□□ -0.87
CUX1-212ENST00000547394 FAAP24Q9BTP7 215 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 UPB1Q9UBR1 384 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 GPR160Q9UJ42 338 aa9.63□□□□□ -0.87
CUX1-212ENST00000547394 MCTS1Q9ULC4 181 aaKnown RBP9.63□□□□□ -0.87
CUX1-212ENST00000547394 IGKV1-12A0A0C4DH73 117 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 POM121CA8CG34 1229 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 IGKV1D-12P01611 117 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 CD74P04233 296 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 MMP7P09237 267 aaPredicted RBP9.62□□□□□ -0.87
CUX1-212ENST00000547394 THBS4P35443 961 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 P2RX3P56373 397 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 ZNF766Q5HY98 468 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 JMJD6Q6NYC1 403 aaPredicted RBP9.62□□□□□ -0.87
CUX1-212ENST00000547394 DRAM2Q6UX65 266 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 MOB3CQ70IA8 216 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 MDS2Q8NDY4 140 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 STEAP2Q8NFT2 490 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 OR5M9Q8NGP3 310 aa9.62□□□□□ -0.87
CUX1-212ENST00000547394 C1QTNF6Q9BXI9 259 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms