RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 UFD1Q92890 307 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 OR5M11Q96RB7 305 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 CHST5Q9GZS9 411 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 PPP1R3EQ9H7J1 279 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 GPR173Q9NS66 373 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 C1orf123Q9NWV4 160 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 RNF7Q9UBF6 113 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 LSM2Q9Y333 95 aaKnown RBP11.63□□□□□ -0.55
PTCH1-213ENST00000546820 DYSFO75923 2080 aa11.63□□□□□ -0.55
PTCH1-213ENST00000546820 PNMA8CA0A1B0GUJ8 204 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 hCG_1807616A0A1W2PRN6 198 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 LRP5LA4QPB2 252 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 VWC2LB2RUY7 222 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 TMEM178BH3BS89 294 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 LMX1BO60663 402 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 TNFAIP8O95379 198 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 HEXAP06865 529 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 USF1P22415 310 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-213ENST00000546820 THBS2P35442 1172 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 MAP2K4P45985 399 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 EMX1Q04741 257 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-213ENST00000546820 MPPED2Q15777 294 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 ZNF367Q7RTV3 350 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 SPARTQ8N0X7 666 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 PARP16Q8N5Y8 322 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 OR10AC1Q8NH08 325 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 ZNF420Q8TAQ5 688 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-213ENST00000546820 ZNF671Q8TAW3 534 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 FCGR1BQ92637 280 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 ADAT3Q96EY9 351 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-213ENST00000546820 MGLLQ99685 303 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 BPESC1Q9GZL8 116 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 ZCCHC4Q9H5U6 513 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 ACOT13Q9NPJ3 140 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 NPTNQ9Y639 398 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 CACNG2Q9Y698 323 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 TEX15Q9BXT5 2789 aa11.62□□□□□ -0.55
PTCH1-213ENST00000546820 MYO9AB2RTY4 2548 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 FAM230AA0A1W2PPH8 454 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 TRIM64A6NGJ6 449 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 TRIM64BA6NI03 449 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 RNF223E7ERA6 249 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 MAGEB3O15480 346 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 CD99P14209 185 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 ATF1P18846 271 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 MAPK3P27361 379 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-213ENST00000546820 SOX2P48431 317 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 ATP1B3P54709 279 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 MLLT11Q13015 90 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-213ENST00000546820 ZNF154Q13106 437 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 TPBGQ13641 420 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 TRAM1Q15629 374 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 UBE2V2Q15819 145 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 Q499Y3 187 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 ZNF773Q6PK81 442 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 DNAAF1Q8NEP3 725 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 HPSE2Q8WWQ2 592 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 BORCS8Q96FH0 119 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 TLNRD1Q9H1K6 362 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 CSMD2Q7Z408 3487 aa11.61□□□□□ -0.55
PTCH1-213ENST00000546820 PPIAL4EA0A075B759 164 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 PQLC2LA1A4F0 135 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 PPIAL4DF5H284 164 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 CDIPTO14735 213 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 ALX3O95076 343 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 PPIAL4FP0DN26 164 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 FOSL1P15407 271 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 CFHR2P36980 270 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 PMELP40967 661 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 LOXL1Q08397 574 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-213ENST00000546820 KCNJ8Q15842 424 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 C11orf53Q8IXP5 236 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 MUC20Q8N307 709 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-213ENST00000546820 SCCPDHQ8NBX0 429 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 TMEM106AQ96A25 262 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 SPSB1Q96BD6 273 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 CPNE2Q96FN4 548 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-213ENST00000546820 PGLYRP3Q96LB9 341 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 OR51I2Q9H344 312 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 CKLFQ9UBR5 152 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 WIPI2Q9Y4P8 454 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 PPIAL4AQ9Y536 164 aa11.6□□□□□ -0.55
PTCH1-213ENST00000546820 A0A087WXM4 84 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 TRBV5-5A0A0J9YX44 114 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 ISPDA4D126 451 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 ZNF879B4DU55 563 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 H7C1Q1 480 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 SULT1B1O43704 296 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 FSTL3O95633 263 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 CYB5R3P00387 301 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-213ENST00000546820 CPEP16870 476 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 RAB3AP20336 220 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 PSMA1P25786 263 aaKnown RBP11.59□□□□□ -0.55
PTCH1-213ENST00000546820 MDH2P40926 338 aaKnown RBP11.59□□□□□ -0.55
PTCH1-213ENST00000546820 HAAOP46952 286 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 RBP2P50120 134 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 MTCP1P56278 107 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 BTG1P62324 171 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 PPP3R1P63098 170 aa11.59□□□□□ -0.55
PTCH1-213ENST00000546820 ARMCX4Q5H9R4 360 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms