RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 TLNRD1Q9H1K6 362 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 GPR173Q9NS66 373 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 WIPI2Q9Y4P8 454 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 SVEP1Q4LDE5 3571 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 ABCA2Q9BZC7 2435 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 ABCA1O95477 2261 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 ANKRD61A6NGH8 418 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 TMEM210A6NLX4 147 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 EEF1B2P24534 225 aaKnown RBP17.24■□□□□ 0.35
HMGA2-211ENST00000545998 GPM6AP51674 278 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 GABARAPL2P60520 117 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 BDH1Q02338 343 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 ACSM1Q08AH1 577 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 AVPI1Q5T686 147 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 C11orf53Q8IXP5 236 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 PP6455Q8WZ26 134 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 FGGYQ96C11 551 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 C18orf12Q96KH6 178 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 CHST5Q9GZS9 411 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 CCDC90BQ9GZT6 254 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 LRRC42Q9Y546 428 aa17.24■□□□□ 0.35
HMGA2-211ENST00000545998 OR5B21A6NL26 309 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 LRRC30A6NM36 301 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 SMAD7O15105 426 aaKnown RBP17.23■□□□□ 0.35
HMGA2-211ENST00000545998 CYB5R3P00387 301 aaPredicted RBP17.23■□□□□ 0.35
HMGA2-211ENST00000545998 GNG3P63215 75 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 SPHARQ15513 63 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 OR11L1Q8NGX0 322 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 GHSRQ92847 366 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 HPS1Q92902 700 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 RAB1CQ92928 201 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 TIMD4Q96H15 378 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 PGLYRP3Q96LB9 341 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 C1orf123Q9NWV4 160 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 ZNF281Q9Y2X9 895 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 NPTNQ9Y639 398 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 MTORP42345 2549 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 A6NLC8 198 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 ZNF732B4DXR9 585 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 WNT9BO14905 357 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 PLPP2O43688 288 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 GATBO75879 557 aaKnown RBP17.23■□□□□ 0.35
HMGA2-211ENST00000545998 IGHV2-70P01814 119 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 FOSL1P15407 271 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 ZNF20P17024 532 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 UBE2V2Q15819 145 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 ZNF826PQ6ZT77 177 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 KCTD8Q6ZWB6 473 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 PEG10Q86TG7 708 aaKnown RBP17.23■□□□□ 0.35
HMGA2-211ENST00000545998 C1orf87Q8N0U7 546 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 GPR148Q8TDV2 347 aa17.23■□□□□ 0.35
HMGA2-211ENST00000545998 PNMA8CA0A1B0GUJ8 204 aa17.22■□□□□ 0.35
HMGA2-211ENST00000545998 SERPINA3P01011 423 aa17.22■□□□□ 0.35
HMGA2-211ENST00000545998 CD1AP06126 327 aa17.22■□□□□ 0.35
HMGA2-211ENST00000545998 IRF2P14316 349 aa17.22■□□□□ 0.35
HMGA2-211ENST00000545998 MED22Q15528 200 aa17.22■□□□□ 0.35
HMGA2-211ENST00000545998 UTS2BQ765I0 119 aa17.22■□□□□ 0.35
HMGA2-211ENST00000545998 TECTBQ96PL2 329 aa17.22■□□□□ 0.35
HMGA2-211ENST00000545998 OR51I2Q9H344 312 aa17.22■□□□□ 0.35
HMGA2-211ENST00000545998 RNF7Q9UBF6 113 aa17.22■□□□□ 0.35
HMGA2-211ENST00000545998 DHDHQ9UQ10 334 aa17.22■□□□□ 0.35
HMGA2-211ENST00000545998 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.21■□□□□ 0.356e-13■□□□□ 10.5
HMGA2-211ENST00000545998 PQLC2LA1A4F0 135 aa17.21■□□□□ 0.35
HMGA2-211ENST00000545998 LRP5LA4QPB2 252 aa17.21■□□□□ 0.35
HMGA2-211ENST00000545998 MRPS14O60783 128 aaKnown RBP17.21■□□□□ 0.35
HMGA2-211ENST00000545998 INHBBP09529 407 aa17.21■□□□□ 0.35
HMGA2-211ENST00000545998 CELP19835 753 aa17.21■□□□□ 0.35
HMGA2-211ENST00000545998 MAP2K4P45985 399 aa17.21■□□□□ 0.35
HMGA2-211ENST00000545998 CHN2P52757 468 aa17.21■□□□□ 0.35
HMGA2-211ENST00000545998 BTG1P62324 171 aa17.21■□□□□ 0.35
HMGA2-211ENST00000545998 ZMYND11Q15326 602 aa17.21■□□□□ 0.35
HMGA2-211ENST00000545998 WDR82Q6UXN9 313 aa17.21■□□□□ 0.35
HMGA2-211ENST00000545998 SCCPDHQ8NBX0 429 aa17.21■□□□□ 0.35
HMGA2-211ENST00000545998 TSEN15Q8WW01 171 aaKnown RBP17.21■□□□□ 0.35
HMGA2-211ENST00000545998 RPL3LQ92901 407 aaKnown RBP17.21■□□□□ 0.35
HMGA2-211ENST00000545998 CDIPTO14735 213 aa17.2■□□□□ 0.34
HMGA2-211ENST00000545998 CFHR2P36980 270 aa17.2■□□□□ 0.34
HMGA2-211ENST00000545998 RPS11P62280 158 aaKnown RBP eCLIP17.2■□□□□ 0.34
HMGA2-211ENST00000545998 HOXA4Q00056 320 aaPredicted RBP17.2■□□□□ 0.34
HMGA2-211ENST00000545998 TBCEQ15813 527 aaPredicted RBP17.2■□□□□ 0.34
HMGA2-211ENST00000545998 YIF1BQ5BJH7 314 aa17.2■□□□□ 0.34
HMGA2-211ENST00000545998 PARP16Q8N5Y8 322 aa17.2■□□□□ 0.34
HMGA2-211ENST00000545998 CLDND2Q8NHS1 167 aa17.2■□□□□ 0.34
HMGA2-211ENST00000545998 NARFLQ9H6Q4 476 aa17.2■□□□□ 0.34
HMGA2-211ENST00000545998 SLC7A11Q9UPY5 501 aa17.2■□□□□ 0.34
HMGA2-211ENST00000545998 IGKV1-9A0A0C4DH69 117 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 hCG_1807616A0A1W2PRN6 198 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 FSTL3O95633 263 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 LHBP01229 141 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 FAM201AQ5SY85 155 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 LRRC28Q86X40 367 aaPredicted RBP17.19■□□□□ 0.34
HMGA2-211ENST00000545998 GCSAMQ8N6F7 178 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 OR13C5Q8NGS8 318 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 NPRL2Q8WTW4 380 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 METTL17Q9H7H0 456 aaPredicted RBP17.19■□□□□ 0.34
HMGA2-211ENST00000545998 ISYNA1Q9NPH2 558 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 TRBV5-5A0A0J9YX44 114 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 ZNF205O95201 554 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 OCM2P0CE71 109 aa17.19■□□□□ 0.34
HMGA2-211ENST00000545998 ATF1P18846 271 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms