RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 CTLA4P16410 223 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 PRKCDQ05655 676 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 KPNB1Q14974 876 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 LDLRAD2Q5SZI1 272 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 TSEN54Q7Z6J9 526 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 FNDC8Q8TC99 324 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 RPS4Y2Q8TD47 263 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 TMEM255BQ8WV15 326 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 BPIFA2Q96DR5 249 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 NRBF2Q96F24 287 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 OSBPL10Q9BXB5 764 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 SNTG1Q9NSN8 517 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 ZNF391Q9UJN7 358 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 SAMHD1Q9Y3Z3 626 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 SMAD5-AS1Q9Y6J3 95 aa12.26□□□□□ -0.45
CLSTN3-216ENST00000545663 A0A087WUU8 490 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 ARRDC5A6NEK1 342 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 FAM90A8PA6NJQ4 464 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 E2F6O75461 281 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 SNRNP70P08621 437 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 NDUFB7P17568 137 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 PAICSP22234 425 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 ANOS1P23352 680 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 CEBPDP49716 269 aaPredicted RBP12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 LGALS4P56470 323 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 CTXN1P60606 82 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 STUMQ69YW2 141 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 LHFPL2Q6ZUX7 228 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 TMPRSS11FQ6ZWK6 438 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 PGAP1Q75T13 922 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 WDR86Q86TI4 376 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 OR51D1Q8NGF3 324 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 OR52H1Q8NGJ2 320 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 P2RX4Q99571 388 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 ABCB10Q9NRK6 738 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 RHCGQ9UBD6 479 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 SLC25A10Q9UBX3 287 aaPredicted RBP12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 SCOCQ9UIL1 159 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 LYVE1Q9Y5Y7 322 aa12.25□□□□□ -0.45
CLSTN3-216ENST00000545663 SH2D7A6NKC9 451 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 DIRAS1O95057 198 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 CCNB2O95067 398 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 IFI30P13284 250 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 RAB25P57735 213 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 CSNK2BP67870 215 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 ATP6AP1Q15904 470 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 SSX2Q16385 188 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 ATPAF1Q5TC12 328 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 CORO6Q6QEF8 472 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 NRMQ8IXM6 262 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 LRRC75AQ8NAA5 344 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 OR52J3Q8NH60 311 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 DNAJC9Q8WXX5 260 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 ISOC1Q96CN7 298 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 GAFA1Q96PS6 74 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 RERGLQ9H628 205 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 ZMAT4Q9H898 229 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 PITPNC1Q9UKF7 332 aa12.24□□□□□ -0.45
CLSTN3-216ENST00000545663 DNAH10Q8IVF4 4471 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 EFCAB9A8MZ26 197 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 IMPA2O14732 288 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 RHBDL1O75783 438 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 LCATP04180 440 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 LPLP06858 475 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 ACSM4P0C7M7 580 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 MYCNOSP40205 109 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 MICAQ29983 383 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 RPL13AP3Q6NVV1 102 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 MRPL21Q7Z2W9 205 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 OAFQ86UD1 273 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 FAM185AQ8N0U4 392 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 LNX2Q8N448 690 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 C11orf42Q8N5U0 333 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 CENPNQ96H22 339 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 COQ7Q99807 217 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 FUZQ9BT04 418 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 SLC22A4Q9H015 551 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 WDR13Q9H1Z4 485 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 ZNF556Q9HAH1 456 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 ATPIF1Q9UII2 106 aa12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 COA3Q9Y2R0 106 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-216ENST00000545663 TRBV4-1A0A0J9YWV2 114 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 A6NIZ1 184 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 F5H5K5 113 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 GLCEO94923 617 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 FRMD6-AS1P0C7T7 363 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 ANXA8P13928 327 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 RAP1BP61224 184 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 RAP1AP62834 184 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 HIST1H3AP68431 136 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 MALLQ13021 153 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 MEP1BQ16820 701 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 KRTAP27-1Q3LI81 207 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 HIST2H3PS2Q5TEC6 136 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 WDR82Q6UXN9 313 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 HIST2H3AQ71DI3 136 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 OR2W3Q7Z3T1 314 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 ZDHHC13Q8IUH4 622 aa12.22□□□□□ -0.45
CLSTN3-216ENST00000545663 OR4C15Q8NGM1 316 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms