RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 E2F6O75461 281 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 MPIG6BO95866 241 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 GYPBP06028 91 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 VSIG10L2P0DP72 767 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 CD28P10747 220 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 GRK5P34947 590 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 MZT1Q08AG7 82 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 ATP6AP1Q15904 470 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 LRRC75BQ2VPJ9 315 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 NCR3LG1Q68D85 454 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 FAHD1Q6P587 224 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 OR1M1Q8NGA1 313 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 OR51L1Q8NGJ5 315 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 OR2AJ1Q8NGZ0 328 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 TEX47Q8TBZ9 253 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 PIFOQ8TCI5 191 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 SPSB4Q96A44 273 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 NRBF2Q96F24 287 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 TLNRD1Q9H1K6 362 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 ZNF702PQ9H963 129 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 CMC2Q9NRP2 79 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 COMMD3-BMI1R4GMX3 469 aa10.42□□□□□ -0.74
USP28-212ENST00000544750 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.41□□□□□ -0.74
USP28-212ENST00000544750 TVP23AA6NH52 213 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 H3BN98 237 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 FBXO24O75426 580 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 OSMP13725 252 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 ANXA8P13928 327 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 SPI1P17947 270 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 RPS27P42677 84 aaKnown RBP10.41□□□□□ -0.74
USP28-212ENST00000544750 DAPP51397 102 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 SLC25A1P53007 311 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 CSNK2BP67870 215 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 CDK5Q00535 292 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 IKZF1Q13422 519 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 LRRC10Q5BKY1 277 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 LINC01590Q5TEZ4 76 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 DRAM2Q6UX65 266 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 ZNF788Q6ZQV5 615 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 CCDC121Q6ZUS5 278 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 NDUFA11Q86Y39 141 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 Q8N2B8 174 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 OR2T4Q8NH00 348 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 OR5K1Q8NHB7 308 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 R3HDM4Q96D70 268 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 FAM234AQ9H0X4 552 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 DNTTIP1Q9H147 329 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 METTL8Q9H825 291 aaKnown RBP10.41□□□□□ -0.74
USP28-212ENST00000544750 MED20Q9H944 212 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 RAB18Q9NP72 206 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 AP4S1Q9Y587 144 aa10.41□□□□□ -0.74
USP28-212ENST00000544750 DYNC2H1Q8NCM8 4307 aaKnown RBP10.41□□□□□ -0.74
USP28-212ENST00000544750 FAM183AA6NL82 134 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 PAX6P26367 422 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 DDOSTP39656 456 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 DGUOKQ16854 277 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 DPY19L4Q7Z388 723 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 AMIGO2Q86SJ2 522 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 PROKR2Q8NFJ6 384 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 OR4F17Q8NGA8 305 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 OR5T2Q8NGG2 359 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 OR51G2Q8NGK0 314 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 SPTSSAQ969W0 71 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 GAFA1Q96PS6 74 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 OR4F4Q96R69 305 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 CITED2Q99967 270 aaPredicted RBP10.4□□□□□ -0.74
USP28-212ENST00000544750 NPFFR1Q9GZQ6 430 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 OPA3Q9H6K4 179 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 PPP1R3EQ9H7J1 279 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 SLC25A19Q9HC21 320 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 HAO2Q9NYQ3 351 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 KCNG2Q9UJ96 466 aa10.4□□□□□ -0.74
USP28-212ENST00000544750 SF3B6Q9Y3B4 125 aaKnown RBP10.4□□□□□ -0.74
USP28-212ENST00000544750 RIIAD1A6NNX1 92 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 IFNGP01579 166 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 HLA-DQA2P01906 255 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 TFF1P04155 84 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 IGLL1P15814 213 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 ZNF3P17036 446 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 POU1F1P28069 291 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 CAV3P56539 151 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 ACTR3P61158 418 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 FAM3AP98173 230 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 HABP2Q14520 560 aaPredicted RBP10.39□□□□□ -0.75
USP28-212ENST00000544750 GINS1Q14691 196 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 KPNB1Q14974 876 aaKnown RBP10.39□□□□□ -0.75
USP28-212ENST00000544750 TMEM236Q5W0B7 351 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 CCBE1Q6UXH8 406 aaPredicted RBP10.39□□□□□ -0.75
USP28-212ENST00000544750 LIAT1Q6ZQX7 453 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 ZNF511Q8NB15 262 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 ANGPTL6Q8NI99 470 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 DNAJC9Q8WXX5 260 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 H1FXQ92522 213 aaKnown RBP10.39□□□□□ -0.75
USP28-212ENST00000544750 WWC2-AS2Q96NR7 200 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 RAB3IPQ96QF0 476 aaPredicted RBP10.39□□□□□ -0.75
USP28-212ENST00000544750 WNT10AQ9GZT5 417 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 GABARAPL1Q9H0R8 117 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 WDR13Q9H1Z4 485 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 ZNF556Q9HAH1 456 aa10.39□□□□□ -0.75
USP28-212ENST00000544750 PAPOLBQ9NRJ5 636 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms