RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	AP4M1	O00189	453 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	PPIH	O43447	177 aa	Known RBP	13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	RAMP1	O60894	148 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	SLC34A2	O95436	690 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	TPT1	P13693	172 aa	Known RBP	13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	CDA	P32320	146 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	TMEM244	Q5VVB8	128 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	FDX2	Q6P4F2	183 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	UNQ6126/PRO20091	Q6UXV3	157 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	PRR18	Q8N4B5	295 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	SLC30A7	Q8NEW0	376 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	AKR7L	Q8NHP1	331 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	SPACA9	Q96E40	222 aa	Predicted RBP	13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	PIK3IP1	Q96FE7	263 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	PTGES2	Q9H7Z7	377 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	PCSK5	Q92824	1860 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	EML6	Q6ZMW3	1958 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	TMEM269	A0A1B0GVZ9	245 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	TMEM235	A6NFC5	223 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	NPIPA5	E9PKD4	350 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	ZNF432	O94892	652 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	LY86	O95711	162 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	SLC2A1	P11166	492 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	NQO2	P16083	231 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	HTR2C	P28335	458 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	PRSS3	P35030	304 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	BID	P55957	195 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	TLE3	Q04726	772 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	ATXN7L3	Q14CW9	347 aa	Predicted RBP	13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	CLEC1A	Q8NC01	280 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	RNF138	Q8WVD3	245 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	PPP1R1C	Q8WVI7	109 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	SEH1L	Q96EE3	360 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	KLRF1	Q9NZS2	232 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	NPIPA1	Q9UND3	350 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	SLC5A6	Q9Y289	635 aa		13.22	□□□□□ -0.29
CHFR-223	ENST00000544268	FRY	Q5TBA9	3013 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	C9orf170	A2RU37	121 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	IGFBP3	P17936	291 aa	Predicted RBP	13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	F2RL1	P55085	397 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	NAAA	Q02083	359 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268		Q0VFX4	171 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	LRRC37A5P	Q49AS3	106 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	CARD17	Q5XLA6	110 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	OR52W1	Q6IF63	320 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	KCTD18	Q6PI47	426 aa	Predicted RBP	13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	TMED4	Q7Z7H5	227 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	ASB17	Q8WXJ9	295 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	CPNE4	Q96A23	557 aa	Predicted RBP	13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	CPNE2	Q96FN4	548 aa	Predicted RBP	13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	LURAP1	Q96LR2	239 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	C5orf34	Q96MH7	638 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	KCNK17	Q96T54	332 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	TOLLIP	Q9H0E2	274 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	RHOF	Q9HBH0	211 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	OR52A1	Q9UKL2	312 aa		13.21	□□□□□ -0.29
CHFR-223	ENST00000544268	RPS2	P15880	293 aa	Known RBP	13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	PTGDS	P41222	190 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	ATP1B3	P54709	279 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	HSF1	Q00613	529 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	C17orf67	Q0P5P2	114 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	NKPD1	Q17RQ9	610 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	MST1L	Q2TV78	715 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	DRAM2	Q6UX65	266 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	BAP18	Q8IXM2	172 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	OR10S1	Q8NGN2	331 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	FGGY	Q96C11	551 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	MICU1	Q9BPX6	476 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	METTL7A	Q9H8H3	244 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	P4HTM	Q9NXG6	502 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	FAM96B	Q9Y3D0	163 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268		R4GMQ9	66 aa		13.21	□□□□□ -0.3
CHFR-223	ENST00000544268	SFTA3	P0C7M3	94 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	FAM157C	P0CG43	387 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	ZNF823	P16415	610 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	CPT2	P23786	658 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	CD34	P28906	385 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	DNASE1L1	P49184	302 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	CAV2	P51636	162 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	STEAP1B	Q6NZ63	245 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	GABRG1	Q8N1C3	465 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	GVQW1	Q8N7I0	195 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	C11orf40	Q8WZ69	217 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	ADAT3	Q96EY9	351 aa	Predicted RBP	13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	C14orf144	Q96I85	54 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	OCSTAMP	Q9BR26	566 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	TUBA4B	Q9H853	241 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	B3GAT1	Q9P2W7	334 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	KLK13	Q9UKR3	277 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	FAM186A	A6NE01	2351 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	C21orf140	B9A014	251 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	RNASEK-C17orf49	H0YIS7	233 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	DLL1	O00548	723 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	IGHM	P01871	453 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	RAB5C	P51148	216 aa		13.2	□□□□□ -0.3
CHFR-223	ENST00000544268	HGFAC	Q04756	655 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms