RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 HYAL3O43820 417 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF32P17041 273 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 CASP3P42574 277 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 ALDH3B2P48448 385 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 FUT6P51993 359 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 ISL1P61371 349 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF141Q15928 474 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 PABPC1L2AQ5JQF8 200 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 NUFIP2Q7Z417 695 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 FAM71E2Q8N5Q1 922 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 PARP16Q8N5Y8 322 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 OR2AE1Q8NHA4 323 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC35B4Q969S0 331 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 MRPS24Q96EL2 167 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 EXOSC3Q9NQT5 275 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 ATXN7O15265 892 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 CCL3P10147 92 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 TPT1P13693 172 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 ANXA7P20073 488 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 NKX2-5P52952 324 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 OR2T2Q6IF00 324 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 CENPVQ7Z7K6 275 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC38A9Q8NBW4 561 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 OR2G2Q8NGZ5 317 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 SMIM19Q96E16 107 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF391Q9UJN7 358 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 NEU3Q9UQ49 428 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 ST3GAL6Q9Y274 331 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 NDUFS6O75380 124 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 WNT1P04628 370 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 SP1P08047 785 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 APEX1P27695 318 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 FMODQ06828 376 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 CDK5R1Q15078 307 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 PDZD11Q5EBL8 140 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 SYT6Q5T7P8 510 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 DNAJC5GQ8N7S2 189 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 HPSE2Q8WWQ2 592 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 ASCL2Q99929 193 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 SRSF8Q9BRL6 282 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 OSGIN2Q9Y236 505 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 RTTNQ86VV8 2226 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 BTF3P20290 206 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 DBPQ10586 325 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 C3AR1Q16581 482 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 ELP2Q6IA86 826 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 Q8IYB0 196 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 DVL3Q92997 716 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 DAZAP1Q96EP5 407 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC25A21Q9BQT8 299 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 C12orf10Q9HB07 376 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 SERTAD4Q9NUC0 356 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 PGPEP1Q9NXJ5 209 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 SIGLEC7Q9Y286 467 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 AMDHD2Q9Y303 409 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 WNK3Q9BYP7 1800 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 SCN10AQ9Y5Y9 1956 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 A0A1W2PS29 197 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 LNP1A1A4G5 178 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 LDLRAD4O15165 306 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 NKX2-8O15522 239 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 LIPAP38571 399 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 GPM6AP51674 278 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 WNT3P56703 355 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 NKX6-1P78426 367 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 TNFAIP6P98066 277 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 DESI1Q6ICB0 168 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 CXorf67Q86X51 503 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 OR2M7Q8NG81 312 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 OTOSQ8NHW6 89 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 VSTM2LQ96N03 204 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 COMMD5Q9GZQ3 224 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 NAA50Q9GZZ1 169 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 KCNIP2Q9NS61 270 aa6.16□□□□□ -1.42
SRGAP1-206ENST00000543397 A0A1W2PQD3 144 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 TO15178 435 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 CPN1P15169 458 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC37A1P57057 533 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 BAXQ07812 192 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 FUT7Q11130 342 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 RFPL4BQ6ZWI9 263 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 BHLHA15Q7RTS1 189 aaPredicted RBP6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 ARL11Q969Q4 196 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 MCHR2Q969V1 340 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 ZG16BQ96DA0 208 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 OR2M2Q96R28 347 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 CEPT1Q9Y6K0 416 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNFX1Q9P2E3 1918 aaKnown RBP6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 A0A1W2PPV9 198 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 M0QZ24 198 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 THBS4P35443 961 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 LTBRP36941 435 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC35A2P78381 396 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 IAH1Q2TAA2 248 aaPredicted RBP6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF626Q68DY1 528 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 CDC20BQ86Y33 519 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 OR6K3Q8NGY3 331 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 SPSB1Q96BD6 273 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 C10orf90Q96M02 699 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms