RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 EEF1E1O43324 174 aaKnown RBP8.08□□□□□ -1.12
GNE-206ENST00000543356 TOXO94900 526 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 HCKP08631 526 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 ACKR3P25106 362 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 APLNRP35414 380 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 RFX2P48378 723 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 INPP1P49441 399 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 GSK3AP49840 483 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 PER3P56645 1201 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 UBE2NP61088 152 aaKnown RBP8.08□□□□□ -1.12
GNE-206ENST00000543356 QRFPP83859 136 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 ZNF92Q03936 586 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 TNK1Q13470 666 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 UBE2V2Q15819 145 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 TMEM42Q69YG0 159 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 CFAP161Q6P656 301 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 NRARPQ7Z6K4 114 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 IZUMO1Q8IYV9 350 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 C17orf78Q8N4C9 275 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 FAM122AQ96E09 287 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 NKX3-1Q99801 234 aaPredicted RBP8.08□□□□□ -1.12
GNE-206ENST00000543356 C11orf54Q9H0W9 315 aaPredicted RBP8.08□□□□□ -1.12
GNE-206ENST00000543356 KCNK15Q9H427 330 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 OPA3Q9H6K4 179 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 CFAP47Q6ZTR5 3102 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 GGT3PA6NGU5 568 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 F8W036 122 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 GABARAPH6UMI1 98 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 J3QW42 95 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 RAD51DO75771 328 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 FAM87AP0C7U9 286 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 UBBP0CG47 229 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 DGCR2P98153 550 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 P2RY6Q15077 328 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 CNN3Q15417 329 aaKnown RBP8.08□□□□□ -1.12
GNE-206ENST00000543356 OR2W3Q7Z3T1 314 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 SPSB1Q96BD6 273 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 ZC3HAV1LQ96H79 300 aaKnown RBP8.08□□□□□ -1.12
GNE-206ENST00000543356 TECTBQ96PL2 329 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 RAB22AQ9UL26 194 aa8.08□□□□□ -1.12
GNE-206ENST00000543356 FREM1Q5H8C1 2179 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 LANCL1O43813 399 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 LYZL6O75951 148 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 IL2RAP01589 272 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 ZNF14P17017 642 aaPredicted RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 CEACAM8P31997 349 aaPredicted RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 ALDH3B1P43353 468 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 MALLQ13021 153 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 AANATQ16613 207 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 AWAT2Q6E213 333 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 MZT2BQ6NZ67 158 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 DNM1P46Q6ZS02 220 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 KRT74Q7RTS7 529 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 BIVMQ86UB2 503 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 CISD2Q8N5K1 135 aaKnown RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 PNLDC1Q8NA58 520 aaKnown RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 SLC30A7Q8NEW0 376 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 UBASH3BQ8TF42 649 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 PCNPQ8WW12 178 aaKnown RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 CPNE2Q96FN4 548 aaPredicted RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 SFXN3Q9BWM7 321 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 GHRLQ9UBU3 117 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 ZNF69Q9UC07 566 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 MRPS28Q9Y2Q9 187 aaKnown RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 CACNA1GO43497 2377 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 ZNF816-ZNF321PA0A0X1KG74 233 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 MEIOCA2RUB1 952 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 TMEM14DPA8MWL7 114 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 LYRM1O43325 122 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 SCGNO76038 276 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 AKR1D1P51857 326 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 PMPCAQ10713 525 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 KISS1Q15726 138 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 TBC1D28Q2M2D7 210 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 ZNF57Q68EA5 555 aaPredicted RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 CRIP3Q6Q6R5 217 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 BEND4Q6ZU67 534 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 ANGPTL5Q86XS5 388 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 ZNF610Q8N9Z0 462 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 PHF21AQ96BD5 680 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 C1orf147Q96MC9 270 aaPredicted RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 NUDT16L1Q9BRJ7 211 aaKnown RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 REPIN1Q9BWE0 567 aaKnown RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 ATG5Q9H1Y0 275 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 RANBP3Q9H6Z4 567 aaPredicted RBP8.07□□□□□ -1.12
GNE-206ENST00000543356 OBP2BQ9NPH6 170 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 COA4Q9NYJ1 87 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 ZNF835Q9Y2P0 537 aa8.07□□□□□ -1.12
GNE-206ENST00000543356 SLC22A5O76082 557 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 FCER2P06734 321 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 CD3GP09693 182 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 VSIG8P0DPA2 414 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 CCL2P13500 99 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 CCNOP22674 350 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 HOXC12P31275 282 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 WNT5AP41221 380 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 OR3A4PP47883 348 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 GZMKP49863 264 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 UNC119Q13432 240 aa8.06□□□□□ -1.12
GNE-206ENST00000543356 GLIPR1L1Q6UWM5 242 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms