RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 PPP1R32Q7Z5V6 425 aa5.74□□□□□ -1.49
PTPRO-208ENST00000542557 ADAD2Q8NCV1 583 aaKnown RBP5.74□□□□□ -1.49
PTPRO-208ENST00000542557 OR5H2Q8NGV7 314 aa5.74□□□□□ -1.49
PTPRO-208ENST00000542557 MARCH1Q8TCQ1 289 aa5.74□□□□□ -1.49
PTPRO-208ENST00000542557 RBM14Q96PK6 669 aaKnown RBP5.74□□□□□ -1.49
PTPRO-208ENST00000542557 CDC6Q99741 560 aa5.74□□□□□ -1.49
PTPRO-208ENST00000542557 RBM24Q9BX46 236 aaKnown RBP5.74□□□□□ -1.49
PTPRO-208ENST00000542557 NMES1Q9C002 83 aa5.74□□□□□ -1.49
PTPRO-208ENST00000542557 RASL12Q9NYN1 266 aa5.74□□□□□ -1.49
PTPRO-208ENST00000542557 PLEK2Q9NYT0 353 aa5.74□□□□□ -1.49
PTPRO-208ENST00000542557 MRPS18CQ9Y3D5 142 aaKnown RBP5.74□□□□□ -1.49
PTPRO-208ENST00000542557 LOC100509620A0A075B734 347 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 TRBV6-7A0A0A0MS04 114 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 SPDEFO95238 335 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 HPP00738 406 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 RLN2P04090 185 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 P04436 131 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 CRHP06850 196 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 CST2P09228 141 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 ACP1P24666 158 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 DLSTP36957 453 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 ATP1B3P54709 279 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 CYCSP99999 105 aaKnown RBP5.73□□□□□ -1.49
PTPRO-208ENST00000542557 SURF2Q15527 256 aaPredicted RBP5.73□□□□□ -1.49
PTPRO-208ENST00000542557 KRTAP27-1Q3LI81 207 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 ABLIM2Q6H8Q1 611 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 H3F3CQ6NXT2 135 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 GGNQ86UU5 652 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 TMEM17Q86X19 198 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 OR51T1Q8NGJ9 327 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 RHBDD1Q8TEB9 315 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 TMEM230Q96A57 120 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 SPSB1Q96BD6 273 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 FBXO17Q96EF6 278 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 CPNE2Q96FN4 548 aaPredicted RBP5.73□□□□□ -1.49
PTPRO-208ENST00000542557 LIN37Q96GY3 246 aaPredicted RBP5.73□□□□□ -1.49
PTPRO-208ENST00000542557 JSRP1Q96MG2 331 aaPredicted RBP5.73□□□□□ -1.49
PTPRO-208ENST00000542557 DNTTIP1Q9H147 329 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 C5orf66Q9H5L9 145 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 OSGIN2Q9Y236 505 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 NCOA6Q14686 2063 aaPredicted RBP5.73□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF716A6NP11 495 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 G3V3Y1 287 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 STMND1H3BQB6 276 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 SFT2D2O95562 160 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 HPNP05981 417 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 FAHP16930 419 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 AKR1C4P17516 323 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 AMY2BP19961 511 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 ECI1P42126 302 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 SCRN3Q0VDG4 424 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 ARFRP1Q13795 201 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF468Q5VIY5 522 aaPredicted RBP5.73□□□□□ -1.49
PTPRO-208ENST00000542557 Q7L0L9 218 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 SULF2Q8IWU5 870 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 LRRC18Q8N456 261 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 BVESQ8NE79 360 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 THAP6Q8TBB0 222 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 CPT1CQ8TCG5 803 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 ADGRG7Q96K78 797 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 NECAB3Q96P71 396 aaPredicted RBP5.73□□□□□ -1.49
PTPRO-208ENST00000542557 VRK1Q99986 396 aaPredicted RBP5.73□□□□□ -1.49
PTPRO-208ENST00000542557 PECRQ9BY49 303 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 RAB18Q9NP72 206 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF391Q9UJN7 358 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 PIGLQ9Y2B2 252 aa5.73□□□□□ -1.49
PTPRO-208ENST00000542557 LRRC3CA6NJW4 275 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 RRP8O43159 456 aaKnown RBP5.72□□□□□ -1.49
PTPRO-208ENST00000542557 SYNGR3O43761 229 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 PDGFBP01127 241 aaPredicted RBP5.72□□□□□ -1.49
PTPRO-208ENST00000542557 AVPR2P30518 371 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 NUP62P37198 522 aaPredicted RBP5.72□□□□□ -1.49
PTPRO-208ENST00000542557 KRBOX4Q5JUW0 171 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 DCAF12Q5T6F0 453 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 RIPPLY2Q5TAB7 128 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 MOB3CQ70IA8 216 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 C1QL2Q7Z5L3 287 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 DTX1Q86Y01 620 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 SEMA6DQ8NFY4 1073 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 CASTOR1Q8WTX7 329 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 SEC22AQ96IW7 307 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 S100A13Q99584 98 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 ZPBPQ9BS86 351 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 PPA2Q9H2U2 334 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 TMEM38BQ9NVV0 291 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 TCFL5Q9UL49 500 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 OR6C6A6NF89 314 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 SGCEO43556 437 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 GOSR1O95249 250 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 DBHP09172 617 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF883P0CG24 379 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 FCGR2AP12318 317 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 PSMB6P28072 239 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 BLVRBP30043 206 aaPredicted RBP5.72□□□□□ -1.49
PTPRO-208ENST00000542557 SERPINF1P36955 418 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 SNU13P55769 128 aaKnown RBP5.72□□□□□ -1.49
PTPRO-208ENST00000542557 CNN3Q15417 329 aaKnown RBP5.72□□□□□ -1.49
PTPRO-208ENST00000542557 SNAI3Q3KNW1 292 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 LRRC37A5PQ49AS3 106 aa5.72□□□□□ -1.49
PTPRO-208ENST00000542557 AADACL3Q5VUY0 350 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms