RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 AKAP9Q99996 3911 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 OTOGQ6ZRI0 2925 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 ANKRD17O75179 2603 aaKnown RBP14.49□□□□□ -0.09
LIG1-204ENST00000542460 TRBV5-7A0A0A0MS05 114 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 IGHV1-69-2A0A0G2JMI3 117 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 TMEM210A6NLX4 147 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 ALX3O95076 343 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 OCMP0CE72 109 aaPredicted RBP14.49□□□□□ -0.09
LIG1-204ENST00000542460 ATF1P18846 271 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 THBS2P35442 1172 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 GPM6AP51674 278 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 FUT6P51993 359 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 GNG3P63215 75 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 FAM76BQ5HYJ3 339 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 CEACAM19Q7Z692 300 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 OR1M1Q8NGA1 313 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 OR13C9Q8NGT0 318 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 DERL3Q96Q80 235 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 FGF23Q9GZV9 251 aaPredicted RBP14.49□□□□□ -0.09
LIG1-204ENST00000542460 NEK6Q9HC98 313 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 GCM1Q9NP62 436 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 DLL4Q9NR61 685 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 CKLFQ9UBR5 152 aa14.49□□□□□ -0.09
LIG1-204ENST00000542460 IGKV1-9A0A0C4DH69 117 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 IGHV3-64DA0A0J9YX35 117 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 A0A1W2PPK0 400 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 ZNF732B4DXR9 585 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 SULT1B1O43704 296 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 CDC14BO60729 498 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 RGS9O75916 674 aaPredicted RBP14.48□□□□□ -0.09
LIG1-204ENST00000542460 GRPP07492 148 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 RAB3AP20336 220 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 PRKACBP22694 351 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 COL8A2P25067 703 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 TGFBR2P37173 567 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 INSL4Q14641 139 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 HFEQ30201 348 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 PRAMEF6Q5VXH4 476 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 ZNF529Q6P280 563 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 WDR86Q86TI4 376 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 DNAAF1Q8NEP3 725 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 PHYHIPQ92561 330 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 SPSB1Q96BD6 273 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 FOXC2Q99958 501 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 FN3KRPQ9HA64 309 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 NOX4Q9NPH5 578 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 TAS2R4Q9NYW5 299 aa14.48□□□□□ -0.09
LIG1-204ENST00000542460 PQLC2LA1A4F0 135 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 GPX5O75715 221 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 PPP3R1P63098 170 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 FABP5Q01469 135 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 ZNF154Q13106 437 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 MPPED2Q15777 294 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 ASPHD2Q6ICH7 369 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 CD200R1LQ6Q8B3 271 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 TMEM91Q6ZNR0 172 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 MOGAT3Q86VF5 341 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 TRMT10AQ8TBZ6 339 aaKnown RBP14.47□□□□□ -0.09
LIG1-204ENST00000542460 NPRL2Q8WTW4 380 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 CCL17Q92583 94 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 ORAI1Q96D31 301 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 BORCS8Q96FH0 119 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 UFSP2Q9NUQ7 469 aa14.47□□□□□ -0.09
LIG1-204ENST00000542460 FAM230AA0A1W2PPH8 454 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 LRP5LA4QPB2 252 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 LYNX1G3V0Z9 82 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 IFNL4K9M1U5 179 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 GABRPO00591 440 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 PIN1P1O15428 100 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 LYNX1P0DP58 116 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 IGFBP3P17936 291 aaPredicted RBP14.46□□□□□ -0.09
LIG1-204ENST00000542460 FSTP19883 344 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 GALP22466 123 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 AZGP1P25311 298 aaKnown RBP14.46□□□□□ -0.09
LIG1-204ENST00000542460 RBP2P50120 134 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 PRSS57Q6UWY2 283 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 ZNF573Q86YE8 665 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 ZNF525Q8N782 197 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 Q8TCH9 128 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 YIPF5Q969M3 257 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 TLNRD1Q9H1K6 362 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 OR51I2Q9H344 312 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 CHODLQ9H9P2 273 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 TREM2Q9NZC2 230 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 FOXJ3Q9UPW0 622 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 CACNG2Q9Y698 323 aa14.46□□□□□ -0.09
LIG1-204ENST00000542460 TRDV1A0A1B0GX56 115 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 A6NLC8 198 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 LRRC30A6NM36 301 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 MAGEB3O15480 346 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 RP2O75695 350 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 ARL6IP5O75915 188 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 CSF3P09919 207 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 UCHL1P09936 223 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 CD36P16671 472 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 PDLIM4P50479 330 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 ATP1B3P54709 279 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 DSCR9P59020 149 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 ZNF181Q2M3W8 571 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 LHFPL2Q6ZUX7 228 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms