RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PLEKHA8Q96JA3 519 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 C7orf34Q96L11 122 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 SEPHS2Q99611 448 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ANKRD60Q9BZ19 345 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 CDH20Q9HBT6 801 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 MYOZ1Q9NP98 299 aaPredicted RBP4.58□□□□□ -1.68
CPSF7-220ENST00000541963 MAN2C1Q9NTJ4 1040 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ZNF224Q9NZL3 707 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 RCC2Q9P258 522 aaKnown RBP4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ERGIC3Q9Y282 383 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 TIMM10BQ9Y5J6 103 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 V9GYQ6 96 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 ABCA4P78363 2273 aa4.58□□□□□ -1.68
CPSF7-220ENST00000541963 AKAP9Q99996 3911 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 TRBV4-1A0A0J9YWV2 114 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 PRSS37A4D1T9 235 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 TRIM64A6NGJ6 449 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 FAM25AB3EWG3 89 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 FAM25CB3EWG5 89 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 FAM25GB3EWG6 89 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 NDUFS8O00217 210 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 TNFRSF11BO00300 401 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 UBE2CO00762 179 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 GNGT2O14610 69 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 KHDRBS3O75525 346 aaKnown RBP4.57□□□□□ -1.68
CPSF7-220ENST00000541963 SULT1C4O75897 302 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 DIRAS1O95057 198 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 RENP00797 406 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 IGHV4-39P01824 125 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 SEMG1P04279 462 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 ACAA1P09110 424 aaPredicted RBP4.57□□□□□ -1.68
CPSF7-220ENST00000541963 CST2P09228 141 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 GSTT2P0CG29 244 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 GSTT2BP0CG30 244 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 ZNF35P13682 527 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 DAOP14920 347 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 SLC25A16P16260 332 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 MSR1P21757 451 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 CCNOP22674 350 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 CRABP1P29762 137 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 CALCRP30988 508 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 SLC6A6P31641 620 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 OMPP47874 163 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 PPOXP50336 477 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 GDI2P50395 445 aaKnown RBP4.57□□□□□ -1.68
CPSF7-220ENST00000541963 PDLIM4P50479 330 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 ARHGDIAP52565 204 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 SEC61A1P61619 476 aaKnown RBP4.57□□□□□ -1.68
CPSF7-220ENST00000541963 RUNX1T1Q06455 604 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 GAGE2BQ13066 116 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 UBE2V1Q13404 147 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 SNTB2Q13425 540 aaKnown RBP4.57□□□□□ -1.68
CPSF7-220ENST00000541963 TNK1Q13470 666 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 FLOT2Q14254 428 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 GK3PQ14409 553 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 RFX4Q33E94 735 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 GAGE2EQ4V326 116 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 C11orf71Q6IPW1 123 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 GAGE2AQ6NT46 116 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 C1orf94Q6P1W5 598 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 SMARCD3Q6STE5 483 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 C9orf47Q6ZRZ4 202 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 ADCK1Q86TW2 530 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 CENPSQ8N2Z9 138 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 LRRC75AQ8NAA5 344 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 NEXN-AS1Q8NBZ9 246 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 SLC30A7Q8NEW0 376 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 OR13C2Q8NGS9 318 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 C11orf40Q8WZ69 217 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 ASB9Q96DX5 294 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 TSPAN32Q96QS1 320 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 GPX7Q96SL4 187 aaPredicted RBP4.57□□□□□ -1.68
CPSF7-220ENST00000541963 MROQ9BYG7 248 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 REG4Q9BYZ8 158 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 BCL2L14Q9BZR8 327 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 TPK1Q9H3S4 243 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 REEP1Q9H902 201 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 SP140LQ9H930 580 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 NOX3Q9HBY0 568 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 DYNLRB1Q9NP97 96 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 GAGE2DQ9UEU5 116 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 POMPQ9Y244 141 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 SIGLEC7Q9Y286 467 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 IER3IP1Q9Y5U9 82 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 CENPEQ02224 2701 aa4.57□□□□□ -1.68
CPSF7-220ENST00000541963 ANKRD17O75179 2603 aaKnown RBP4.57□□□□□ -1.68
CPSF7-220ENST00000541963 CSMD1Q96PZ7 3565 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 MED13LQ71F56 2210 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 A0A1W2PPW3 197 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 LOC390937A0A1W2PQ73 354 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 CLDN25C9JDP6 229 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 CDC42EP2O14613 210 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 ARPC3O15145 178 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 SYNGR3O43761 229 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 SLC16A7O60669 478 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 KDM4BO94953 1096 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 CCNB2O95067 398 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 SLC2A10O95528 541 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 SNAP29O95721 258 aa4.56□□□□□ -1.68
CPSF7-220ENST00000541963 TXNDC12O95881 172 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms