RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PCGF1Q9BSM1 259 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 CADM1Q9BY67 442 aaKnown RBP8.63□□□□□ -1.03
CDCA3-208ENST00000540683 GABARAPL1Q9H0R8 117 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 PRDM13Q9H4Q3 707 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 NEK6Q9HC98 313 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 ACOXLQ9NUZ1 547 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 CLN6Q9NWW5 311 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 FAM53CQ9NYF3 392 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 NUFIP1Q9UHK0 495 aaKnown RBP8.63□□□□□ -1.03
CDCA3-208ENST00000540683 RPUSD1Q9UJJ7 312 aaKnown RBP8.63□□□□□ -1.03
CDCA3-208ENST00000540683 SNX5Q9Y5X3 404 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 ARHGAP32A7KAX9 2087 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 TRBV23-1A0A0A0MS06 115 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 LOC110117498-PIK3R3F6TDL0 507 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 DLGAP1O14490 977 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 CDIPTO14735 213 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 TNFRSF13BO14836 293 aaPredicted RBP8.62□□□□□ -1.03
CDCA3-208ENST00000540683 DHRS3O75911 302 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 SERPINA3P01011 423 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 KRT8P05787 483 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 OR2T7P0C7T2 308 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 GLRA1P23415 457 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 CAV3P56539 151 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 ZFP1Q6P2D0 407 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF322Q6U7Q0 402 aaPredicted RBP8.62□□□□□ -1.03
CDCA3-208ENST00000540683 LYPD2Q6UXB3 125 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 FAM220AQ7Z4H9 259 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 OR5D13Q8NGL4 314 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 OR8J1Q8NGP2 316 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 OR2T27Q8NH04 317 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 TRUB1Q8WWH5 349 aaKnown RBP8.62□□□□□ -1.03
CDCA3-208ENST00000540683 C10orf35Q96D05 121 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 RBM4BQ9BQ04 359 aaKnown RBP8.62□□□□□ -1.03
CDCA3-208ENST00000540683 ADI1Q9BV57 179 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF747Q9BV97 191 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 PBOV1Q9GZY1 135 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 PLEKHA1Q9HB21 404 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 BEX1Q9HBH7 125 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 PCDHGB1Q9Y5G3 927 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 ANK2Q01484 3957 aa8.62□□□□□ -1.03
CDCA3-208ENST00000540683 IGHV1-69DA0A0B4J2H0 117 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 ZAR1LA6NP61 321 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 M0R1W7 72 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 SLC1A7O00341 560 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 SULT1C4O75897 302 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 PAHP00439 452 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 NRASP01111 189 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 IGHV1-69P01742 117 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 FBP1P09467 338 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 IGHV4-38-2P0DP08 117 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 PSKH1P11801 424 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 DAPP51397 102 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 GPM6AP51674 278 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 SLC9A3R2Q15599 337 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 WDR38Q5JTN6 314 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 CLVS2Q5SYC1 327 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 SLX4IPQ5VYV7 408 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 PLCXD3Q63HM9 321 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 KDM4DQ6B0I6 523 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 Q6YL49 198 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 PLEKHG7Q6ZR37 379 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF826PQ6ZT77 177 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 KCTD20Q7Z5Y7 419 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 EGFL6Q8IUX8 553 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 SLC35F2Q8IXU6 374 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 HS3ST5Q8IZT8 346 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 DYRK2Q92630 601 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 RAB3IPQ96QF0 476 aaPredicted RBP8.61□□□□□ -1.03
CDCA3-208ENST00000540683 AMELYQ99218 206 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 FAM234AQ9H0X4 552 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 SLITRK2Q9H156 845 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 METTL8Q9H825 291 aaKnown RBP8.61□□□□□ -1.03
CDCA3-208ENST00000540683 ESM1Q9NQ30 184 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 FAM206AQ9NX38 181 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 IMPAD1Q9NX62 359 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 ONECUT1Q9UBC0 465 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 NLKQ9UBE8 527 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 CTSZQ9UBR2 303 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 SLC25A10Q9UBX3 287 aaPredicted RBP8.61□□□□□ -1.03
CDCA3-208ENST00000540683 GTF2A1LQ9UNN4 478 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 SLC7A11Q9UPY5 501 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 PIGLQ9Y2B2 252 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 MMP24Q9Y5R2 645 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 R4GMQ9 66 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 NBEAL1Q6ZS30 2694 aa8.61□□□□□ -1.03
CDCA3-208ENST00000540683 A0A1W2PQ09 198 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 OR2AT4A6NND4 320 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 C22orf46C9J442 243 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 H3BUI4 141 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 SIGLEC5O15389 551 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 GATBO75879 557 aaKnown RBP8.6□□□□□ -1.03
CDCA3-208ENST00000540683 CYB5AP00167 134 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 ACAA1P09110 424 aaPredicted RBP8.6□□□□□ -1.03
CDCA3-208ENST00000540683 HTR1FP30939 366 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 TGM4P49221 684 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 CXCR4P61073 352 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 CSNK2BP67870 215 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 ACTC1P68032 377 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms