RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 APOBEC1P41238 236 aaKnown RBP8.39□□□□□ -1.07
CLIP1-214ENST00000540539 METAP1P53582 386 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 TAS2R41P59536 307 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 HLA-DRB3P79483 266 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 ZNF763Q0D2J5 394 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 SPEM2Q0P670 501 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 SAMD13Q5VXD3 122 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 RPL22L1Q6P5R6 122 aaKnown RBP8.39□□□□□ -1.07
CLIP1-214ENST00000540539 SHISA2Q6UWI4 295 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 ST6GALNAC3Q8NDV1 305 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 OR2T27Q8NH04 317 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 AQP3Q92482 292 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 IL22RA2Q969J5 263 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 NICN1Q9BSH3 213 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 ADAM29Q9UKF5 820 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 LRP12Q9Y561 859 aa8.39□□□□□ -1.07
CLIP1-214ENST00000540539 A0A1B0GU03 582 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 A0A1B0GV72 72 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 CDC42EP2O14613 210 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 TSPAN6O43657 245 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 SYNGR4O95473 234 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 CTSDP07339 412 aaPredicted RBP8.38□□□□□ -1.07
CLIP1-214ENST00000540539 SEC11BP0C7V7 166 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 PTNP21246 168 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 TNFSF4P23510 183 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 FCGR2CP31995 323 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 WDR25Q64LD2 544 aaPredicted RBP8.38□□□□□ -1.07
CLIP1-214ENST00000540539 SYT13Q7L8C5 426 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 TMEM150AQ86TG1 271 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 C17orf78Q8N4C9 275 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 ZDHHC22Q8N966 263 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 OR10S1Q8NGN2 331 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 ZNF596Q8TC21 504 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 TMEM37Q8WXS4 190 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 WFDC1Q9HC57 220 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 SLC45A2Q9UMX9 530 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 C14orf166Q9Y224 244 aaKnown RBP8.38□□□□□ -1.07
CLIP1-214ENST00000540539 KCNK6Q9Y257 313 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 ZNF814B7Z6K7 855 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 H3BNC9 293 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 KLF4O43474 513 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 SAP30O75446 220 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 CD55P08174 381 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 PET100P0DJ07 73 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 RPL12P30050 165 aaKnown RBP8.38□□□□□ -1.07
CLIP1-214ENST00000540539 SLC6A12P48065 614 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 RAB38P57729 211 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 ADAM8P78325 824 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 GPM6BQ13491 265 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 MPV17LQ2QL34 196 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 PLPP4Q5VZY2 271 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 UMODL1-AS1Q8N2C9 162 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 OR51D1Q8NGF3 324 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 OR52E1Q8NGJ3 308 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 OR2AJ1Q8NGZ0 328 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 OR4S2Q8NH73 311 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 FAM213BQ8TBF2 198 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 ADIPOR1Q96A54 375 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 OR10C1Q96KK4 312 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 CMKLR1Q99788 373 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 SH3BGRL3Q9H299 93 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 P4HTMQ9NXG6 502 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 PRR13Q9NZ81 148 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 MARCH2Q9P0N8 246 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 LAMP3Q9UQV4 416 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 RFNGQ9Y644 331 aa8.38□□□□□ -1.07
CLIP1-214ENST00000540539 C4orf47A7E2U8 309 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 HHLA1C9JL84 531 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 HMGN4O00479 90 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 GNG7O60262 68 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 GYPBP06028 91 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 LAMP2P13473 410 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 ERVS71-1P61550 626 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 BTN3A2P78410 334 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 SMAD3P84022 425 aaKnown RBP8.37□□□□□ -1.07
CLIP1-214ENST00000540539 ARF5P84085 180 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 PDE7AQ13946 482 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 OR51A7Q8NH64 312 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 KLK6Q92876 244 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 TIFAQ96CG3 184 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 SPACA9Q96E40 222 aaPredicted RBP8.37□□□□□ -1.07
CLIP1-214ENST00000540539 ZNF479Q96JC4 524 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 CMC2Q9NRP2 79 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 PNO1Q9NRX1 252 aaKnown RBP8.37□□□□□ -1.07
CLIP1-214ENST00000540539 TMEM106BQ9NUM4 274 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 FBXO34Q9NWN3 711 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 RCL1Q9Y2P8 373 aaKnown RBP8.37□□□□□ -1.07
CLIP1-214ENST00000540539 STRAPQ9Y3F4 350 aaKnown RBP8.37□□□□□ -1.07
CLIP1-214ENST00000540539 LIPGQ9Y5X9 500 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 WSB1Q9Y6I7 421 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 OR5B21A6NL26 309 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 HIDE1A8MVS5 230 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 STK17BO94768 372 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 IGLV3-25P01717 112 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 CD1AP06126 327 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 CYC1P08574 325 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 PPIAL4GP0DN37 164 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 ERASQ7Z444 233 aa8.37□□□□□ -1.07
CLIP1-214ENST00000540539 MRPL43Q8N983 215 aaKnown RBP8.37□□□□□ -1.07
CLIP1-214ENST00000540539 C2orf15Q8WU43 125 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms